| Species: | Diplazium dilatatum |
| NCBI Taxonomy: | 86694 |
| Organelle: | Chloroplast (NC_035850.1) |
| Edited Genes: | 58 |
| Editing Events: | 134 |
| Gene | Editing Events | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| accD | 2 | 55149 54373 | CDS CDS | + + | mRNA mRNA | U-to-C C-to-U | UAA=>CAA ACG=>AUG | TERM=>Q T=>M |
| atpA | 3 | 10540 11464 10043-11566 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpB | 1 | 50291-51772 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| atpF | 3 | 11647-12056 12755-12899 12898 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpH | 2 | 13240-13485 13484 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpI | 3 | 14910 14978 14233-14979 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C C-to-U NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlB | 2 | 4755-6299 6050 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| chlL | 4 | 126811-127692 127691 126813 126969 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| chlN | 1 | 125358-126743 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| infA | 2 | 76018 75842-76084 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| matK | 3 | 1433-2935 2677 2671 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ndhA | 2 | 117451-118008 115939-116496 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhB | 2 | 490-1227 149966-150736 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhC | 2 | 47945-48307 47947 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhD | 1 | 111931-113439 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhE | 2 | 114141-114443 114442 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhF | 4 | 105848-108079 108078 107719 107443 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| ndhG | 2 | 114534-115127 115126 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhH | 1 | 118010-119188 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhI | 1 | 115264-115794 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhK | 1 | 47217-47954 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| Novel | 1 | 1226 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| petA | 2 | 58886 58895 | CDS CDS | + + | mRNA mRNA | U-to-C U-to-C | UAG=>CAG UAA=>CAA | TERM=>Q TERM=>Q |
| petB | 1 | 72444 | CDS | + | mRNA | C-to-U | CGA=>UGA | R=>TERM |
| petD | 2 | 72646-72653 73303-73774 | CDS CDS | + + | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| petN | 3 | 28965-29054 29053 28967 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| psaB | 2 | 38642 36439-38643 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaC | 1 | 113577-113822 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbB | 2 | 68400 69923 | CDS CDS | + + | mRNA mRNA | C-to-U C-to-U | ACG=>AUG CAA=>UAA | T=>M Q=>TERM |
| psbC | 1 | 31322-32743 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbD | 1 | 32742 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| psbE | 2 | 60940-61191 61140 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbF | 1 | 60811-60930 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbH | 1 | 70641 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbM | 1 | 27998 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbT | 1 | 70169 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rpl14 | 2 | 77191 76824-77192 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl16 | 4 | 77446 78615 77444-77848 78608-78616 | NA NA CDS CDS | + + - - | Unanotated Transcript Unanotated Transcript mRNA mRNA | C-to-U C-to-U NA NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpl2 | 3 | 80200-80636 81361-81757 81748 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl21 | 1 | 108661 | CDS | + | mRNA | U-to-C | UGA=>CGA | TERM=>R |
| rpl22 | 2 | 79492-79869 79623 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl23 | 2 | 82097 81826-82098 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoA | 2 | 74862 74080-75102 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoB | 7 | 23258-26473 23893 26245 26347 24742 24790 25756 | CDS NA NA NA NA NA NA | - + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC1 | 5 | 23206 23093 21245 22776-23207 20409-22073 | NA NA NA CDS CDS | + + + - - | Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA mRNA | C-to-U U-to-C U-to-C NA NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC2 | 2 | 20053 16007-20284 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps11 | 2 | 75135-75527 75407 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps15 | 2 | 119561 119293-119562 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps16 | 3 | 3556-3786 4559-4600 4599 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps18 | 1 | 63889 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rps19 | 1 | 79887-80165 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| rps2 | 4 | 15486 15363 15450 15163-15879 | NA NA NA CDS | + + + - | Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps3 | 2 | 78728-79384 79339 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps4 | 2 | 43932-44552 44551 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps7 | 2 | 137715 95811 | NA CDS | + + | Unanotated Transcript mRNA | U-to-C U-to-C | NA=>NA UAA=>CAA | NA=>NA TERM=>Q |
| ycf1 | 3 | 119865-124973 124972 124010 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ycf2 | 12 | 130546 131443 133501 133714 128857 134860 99812 100025 102083 104669 98666 102980 | NA NA NA NA NA NA CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + | Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA mRNA mRNA mRNA mRNA mRNA | U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA UAA=>CAA UAA=>CAA UAA=>CAA UAA=>CAA UGA=>CGA UAA=>CAA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA TERM=>Q TERM=>Q TERM=>Q TERM=>Q TERM=>R TERM=>Q |
| ycf3 | 4 | 42043-42271 41256-41417 43002-43126 42231 | CDS CDS CDS NA | - - - + | mRNA mRNA mRNA Unanotated Transcript | NA NA NA U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
( NA = Data Not Available )