chlB - Plant Editosome Database - BIG Data Center

Summary

Gene: chlB
Function: Protochlorophyllide reductase
Species: 47
Editing Types:
U-to-C (72)
C-to-U (14)
Editing Events: 134 (U-to-C: 72   NA: 48   C-to-U: 14)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
4441-6070CDS-NANA=>NANA=>NA
Alsophila spinulosaChloroplast1
NA: 1
5141-6682CDS-NANA=>NANA=>NA
Ampelopteris proliferaChloroplast2
NA: 1
U-to-C: 1
4863-6407
6158
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Anthoceros angustusChloroplast26
C-to-U: 11
U-to-C: 15
24929
24935
24936
24998
25110
25116
25137
25149
25200
25217
25220
25235
25247
25259
25353
25400
25494
25575
25607
25685
25688
25710
25971
26040
26057
26253
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+U-to-C
U-to-C
C-to-U
C-to-U
U-to-C
C-to-U
U-to-C
C-to-U
U-to-C
C-to-U
U-to-C
U-to-C
C-to-U
U-to-C
C-to-U
U-to-C
C-to-U
U-to-C
C-to-U
C-to-U
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
C-to-U
CUC=>CCC
UAU=>CAU
CUU=>UUU
CAU=>UAU
UGA=>CGA
UCA=>UUA
UUU=>CUU
UCG=>UUG
UGA=>CGA
ACU=>AUU
UCU=>CCU
UUU=>UCU
CUA=>UUA
CUU=>CCU
UCA=>UUA
CUA=>CCA
UCA=>UUA
UGA=>CGA
UCA=>UUA
UCC=>UUC
UAA=>CAA
UAA=>CAA
UAA=>CAA
GUU=>GCU
UAG=>CAG
UCA=>UUA
L=>P
Y=>H
L=>F
H=>Y
TERM=>R
S=>L
F=>L
S=>L
TERM=>R
T=>I
S=>P
F=>S
L=>L
L=>P
S=>L
L=>P
S=>L
TERM=>R
S=>L
S=>F
TERM=>Q
TERM=>Q
TERM=>Q
V=>A
TERM=>Q
S=>L
Asplenium pekinenseChloroplast3
NA: 1
U-to-C: 2
4772-6316
5935
6067
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asplenium prolongatumChloroplast2
NA: 1
U-to-C: 1
4781-6325
6076
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium anisopterumChloroplast2
NA: 1
U-to-C: 1
4801-6345
6096
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium opacumChloroplast2
NA: 1
U-to-C: 1
4816-6360
6111
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sheareriChloroplast2
NA: 1
U-to-C: 1
4815-6359
6110
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sinenseChloroplast2
NA: 1
U-to-C: 1
4827-6371
6122
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Austroblechnum melanocaulonChloroplast3
NA: 1
U-to-C: 2
4786-6330
5949
6081
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Christella appendiculataChloroplast2
NA: 1
U-to-C: 1
4862-6406
6157
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cyrtomium devexiscapulaeChloroplast3
NA: 1
U-to-C: 2
4910-6454
6073
6205
CDS
NA
NA
-
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cyrtomium falcatumChloroplast3
NA: 1
U-to-C: 2
5057-6601
6220
6352
CDS
NA
NA
-
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cystopteris chinensisChloroplast3
NA: 1
U-to-C: 2
4822-6366
5985
6117
CDS
NA
NA
-
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia lanceaChloroplast2
NA: 1
U-to-C: 1
4816-6360
6111
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia pycnosoraChloroplast2
NA: 1
U-to-C: 1
4811-6355
6106
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia viridifronsChloroplast2
NA: 1
U-to-C: 1
4810-6354
6105
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis cavalerianaChloroplast3
NA: 1
U-to-C: 2
4887-6431
6050
6182
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis javanicaChloroplast3
NA: 1
U-to-C: 2
4899-6443
6062
6194
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium bellumChloroplast2
NA: 1
U-to-C: 1
4781-6325
6076
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dilatatumChloroplast2
NA: 1
U-to-C: 1
4755-6299
6050
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dushanenseChloroplast2
NA: 1
U-to-C: 1
4769-6313
6064
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium striatumChloroplast2
NA: 1
U-to-C: 1
4773-6317
6068
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium unilobumChloroplast2
NA: 1
U-to-C: 1
4790-6334
6085
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplopterygium glaucumChloroplast1
NA: 1
19471-21012NA-NANA=>NANA=>NA
Dryopteris decipiensChloroplast3
NA: 1
U-to-C: 2
4890-6434
6053
6185
CDS
NA
NA
-
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Homalosorus pycnocarposChloroplast3
NA: 1
U-to-C: 2
4917-6461
6080
6212
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hymenasplenium unilateraleChloroplast3
NA: 1
U-to-C: 2
4675-6219
5838
5970
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypodematium crenatumChloroplast2
NA: 1
U-to-C: 1
4850-6394
6145
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lepisorus clathratusChloroplast3
NA: 1
U-to-C: 2
3631-5175
4794
4926
NA
NA
CDS
+
-
U-to-C
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lygodium japonicumChloroplast1
NA: 1
5573-7114CDS-NANA=>NANA=>NA
Macrothelypteris torresianaChloroplast2
NA: 1
U-to-C: 1
4865-6409
6160
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Marsilea crenataChloroplast1
NA: 1
7549-9090CDS-NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast3
NA: 1
U-to-C: 2
4835-6379
5998
6130
CDS
NA
NA
-
+
NA
U-to-C
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Myriopteris lindheimeriChloroplast2
NA: 1
U-to-C: 1
4874-6418
6169
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Nothoceros aenigmaticusPlastid2
NA: 2
29664-31205NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast2
NA: 1
U-to-C: 1
4768-6312
6063
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pseudophegopteris auritaChloroplast2
NA: 1
U-to-C: 1
4857-6407
6158
CDS
NA
-
+
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Pteridium aquilinum subsp. aquilinumChloroplast3
C-to-U: 1
NA: 1
U-to-C: 1
4859-6403
6022
6154
NA
NA
CDS
+
-
C-to-U
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhachidosorus consimilisChloroplast3
NA: 1
U-to-C: 2
4833-6377
5996
6128
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Schizaea elegansChloroplast1
NA: 1
155486-157027CDS-NANA=>NANA=>NA
Schizaea pectinataChloroplast6
C-to-U: 2
U-to-C: 4
155928
156060
156308
73304
73552
73684
NA
CDS
NA
CDS
NA
CDS
+U-to-C
U-to-C
C-to-U
C-to-U
U-to-C
U-to-C
NA=>NA
UAA=>CAA
NA=>NA
ACG=>AUG
NA=>NA
UGA=>CGA
NA=>NA
TERM=>Q
NA=>NA
T=>M
NA=>NA
TERM=>R
Stegnogramma sagittifoliaChloroplast2
NA: 1
U-to-C: 1
4859-6403
6154
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia macrochlaenaChloroplast3
NA: 1
U-to-C: 2
4816-6360
5979
6111
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia polystichoidesChloroplast3
NA: 1
U-to-C: 2
4839-6383
6002
6134
NA
CDS
NA
+
-
U-to-C
NA
U-to-C
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodwardia unigemmataChloroplast2
NA: 1
U-to-C: 1
4812-6356
6107
NA
CDS
+
-
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)