| Species: | Cyrtomium devexiscapulae |
| NCBI Taxonomy: | 306069 |
| Organelle: | Chloroplast (NC_028542.1) |
| Edited Genes: | 47 |
| Editing Events: | 120 |
| Gene | Editing Events | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| accD | 2 | 55233 54457 | CDS CDS | + + | mRNA mRNA | U-to-C C-to-U | UAA=>CAA ACG=>AUG | TERM=>Q T=>M |
| atpA | 3 | 11614 10690 10193-11716 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpH | 2 | 13445-13690 13689 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpI | 3 | 15148 15080 14403-15149 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | C-to-U U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlB | 3 | 4910-6454 6073 6205 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlL | 2 | 127065-127946 127945 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| infA | 3 | 75964 75910 75788-76030 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| matK | 3 | 1525-3027 2763 2769 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ndhB | 2 | 150618 83520 | NA CDS | + + | Unanotated Transcript mRNA | C-to-U C-to-U | NA=>NA CAG=>UAG | NA=>NA Q=>TERM |
| ndhC | 2 | 47908-48270 47910 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhF | 3 | 106238-108445 108085 107809 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ndhG | 2 | 114758-115351 115350 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Novel | 1 | 566 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| petA | 2 | 58943 58952 | CDS CDS | + + | mRNA mRNA | U-to-C U-to-C | UAG=>CAG UAA=>CAA | TERM=>Q TERM=>Q |
| petD | 1 | 72599 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| petN | 2 | 29308-29397 29396 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaB | 2 | 38847 36644-38848 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbB | 2 | 68339 69862 | CDS CDS | + + | mRNA mRNA | C-to-U C-to-U | ACG=>AUG CAA=>UAA | T=>M Q=>TERM |
| psbC | 1 | 31589-33010 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbD | 1 | 33009 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| psbJ | 1 | 60362 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| psbL | 2 | 60599-60715 60714 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbM | 1 | 27977 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbN | 1 | 70343-70474 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| rpl14 | 2 | 77144 76777-77145 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl16 | 3 | 78601 77399-77803 78594-78602 | NA CDS CDS | + - - | Unanotated Transcript mRNA mRNA | C-to-U NA NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl2 | 4 | 81366-81762 80204-80640 81753 80581 | CDS CDS NA NA | - - + + | mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpl21 | 1 | 109022 | CDS | + | mRNA | U-to-C | UGA=>CGA | TERM=>R |
| rpl22 | 2 | 79496-79873 79627 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl32 | 1 | 109284-109460 | CDS | + | mRNA | NA | NA=>NA | NA=>NA |
| rpl36 | 2 | 75670 75558-75671 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoA | 2 | 74060 74043-75059 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoB | 8 | 23451-26666 24983 26540 26438 24236 24086 25949 24935 | CDS NA NA NA NA NA NA NA | - + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC1 | 4 | 21453 23283 22966-23397 20659-22281 | NA NA CDS CDS | + + - - | Unanotated Transcript Unanotated Transcript mRNA mRNA | U-to-C U-to-C NA NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC2 | 2 | 20258 16191-20489 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps11 | 2 | 75096-75488 75368 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps12 | 1 | 139393 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| rps15 | 2 | 119812 119544-119813 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps16 | 3 | 3664-3894 4720-4761 3684 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps18 | 1 | 63807 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rps2 | 4 | 15670 15634 15547 15347-16063 | NA NA NA CDS | + + + - | Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps3 | 3 | 78726-79382 79337 79381 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps4 | 2 | 44009-44629 44428 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps7 | 4 | 138335 138359 95803 95779 | NA NA CDS CDS | + + + + | Unanotated Transcript Unanotated Transcript mRNA mRNA | U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA UAA=>CAA UAA=>CAA | NA=>NA NA=>NA TERM=>Q TERM=>Q |
| ycf1 | 3 | 120116-125221 125220 124258 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ycf2 | 12 | 134182 131227 129490 134395 135544 132124 102014 99956 99743 102911 104648 98594 | NA NA NA NA NA NA CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + | Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA mRNA mRNA mRNA mRNA mRNA | U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA UAA=>CAA UAA=>CAA UAA=>CAA UAA=>CAA UAA=>CAA UGA=>CGA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA TERM=>Q TERM=>Q TERM=>Q TERM=>Q TERM=>Q TERM=>R |
| ycf3 | 5 | 43197-43321 42243-42471 41456-41617 43320 42431 | CDS CDS CDS NA NA | - - - + + | mRNA mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA NA C-to-U U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
( NA = Data Not Available )