Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yeild

Pfam

 
 
 

Setting Properties

limit the maximum number of items
Items  1  - 10 of 19861824       Items per page  First Prev of 1986183 Next Last
All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
ptc17 chr1:1201 G/A G:0.0000 downstream_gene_variant|MODIFIER Potri.001G000100  
downstream_gene_variant|MODIFIER Potri.001G000200 (POPTRDRAFT_750398)
ptc18 chr1:1204 A/G A:0.0000 downstream_gene_variant|MODIFIER Potri.001G000100  
downstream_gene_variant|MODIFIER Potri.001G000200 (POPTRDRAFT_750398)
ptc19 chr1:1205 C/T C:0.0000 downstream_gene_variant|MODIFIER Potri.001G000100  
downstream_gene_variant|MODIFIER Potri.001G000200 (POPTRDRAFT_750398)
ptc20 chr1:1207 T/A T:0.0000 downstream_gene_variant|MODIFIER Potri.001G000100  
downstream_gene_variant|MODIFIER Potri.001G000200 (POPTRDRAFT_750398)
ptc21 chr1:1294 T/A T:0.0000 downstream_gene_variant|MODIFIER Potri.001G000100  
downstream_gene_variant|MODIFIER Potri.001G000200 (POPTRDRAFT_750398)
ptc22 chr1:1300 G/T G:0.0000 downstream_gene_variant|MODIFIER Potri.001G000100  
downstream_gene_variant|MODIFIER Potri.001G000200 (POPTRDRAFT_750398)
ptc23 chr1:1349 T/A T:0.0000 downstream_gene_variant|MODIFIER Potri.001G000100  
downstream_gene_variant|MODIFIER Potri.001G000200 (POPTRDRAFT_750398)
ptc24 chr1:1365 T/G T:0.0000 downstream_gene_variant|MODIFIER Potri.001G000100  
downstream_gene_variant|MODIFIER Potri.001G000200 (POPTRDRAFT_750398)
ptc25 chr1:1417 G/A G:0.0000 downstream_gene_variant|MODIFIER Potri.001G000100  
downstream_gene_variant|MODIFIER Potri.001G000200 (POPTRDRAFT_750398)
ptc26 chr1:1418 T/C T:0.0000 downstream_gene_variant|MODIFIER Potri.001G000100  
downstream_gene_variant|MODIFIER Potri.001G000200 (POPTRDRAFT_750398)