- GVM / Search / pop20
Basic Information
| SNP ID |
pop20
|
| Organism |
Populus trichocarpa |
| Genome Assembly |
JGI v3.0 |
| Version |
1
|
| Variation Class |
SNP
|
| Position |
chr1:1207 |
| RefSNP Alleles |
T/A |
| Synonyms ID |
|
Gene Annotation
| Gene ID |
Transcript ID |
Gene Symbol |
Variant Effect |
Biotype |
cDNA Position |
Allele Change |
Protein ID |
Protein Position |
Residue Change |
|
Potri.001G000100
|
|
|
downstream_gene_variant |
mRNA |
0
|
-
=> -
|
Potri.001G000100.1 |
0
|
-
=> -
|
|
Potri.001G000200
|
|
POPTRDRAFT_750398 |
downstream_gene_variant |
mRNA |
0
|
-
=> -
|
Potri.001G000200.1 |
0
|
-
=> -
|
Population Diversity
| Population |
Sample # |
Allele:Frequency |
Genotype:Frequency |
|
Populus |
298 |
T:0; A:0; |
NN:; |
|
Populus_deltoides |
574 |
T:0; A:0; |
NN:; |
|
Populus_nigra |
46 |
T:0.00; A:1.00; |
AA:1.00; |
|
Populus_simonii |
1 |
T:0; A:0; |
NN:; |
