Basic information
Locus name	AT4G29050
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification:protein kinase and phosphatases
Effect for Senescence	unclear
Gene Description	lectin protein kinase family protein contains Pfam domains, PF00138: Legume lectins alpha domain, PF00139: Legume lectins beta domain and PF00069: Protein kinase domain
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process protein phosphorylation molecular function ATP binding carbohydrate binding protein kinase activity protein serine/threonine kinase activity
Sequence	AT4G29050.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_129991	Accession Taxon NP_001078773 Arabidopsis thaliana NP_177168 Arabidopsis thaliana NP_177170 Arabidopsis thaliana NP_181307 Arabidopsis thaliana NP_181897 Arabidopsis thaliana NP_181898 Arabidopsis thaliana NP_190119 Arabidopsis thaliana NP_190127 Arabidopsis thaliana NP_190128 Arabidopsis thaliana NP_190129 Arabidopsis thaliana NP_190130 Arabidopsis thaliana NP_190949 Arabidopsis thaliana NP_191114 Arabidopsis thaliana NP_191529 Arabidopsis thaliana NP_191532 Arabidopsis thaliana NP_191533 Arabidopsis thaliana NP_191534 Arabidopsis thaliana NP_194634 ( AT4G29050 ) Arabidopsis thaliana NP_200734 Arabidopsis thaliana NP_200735 Arabidopsis thaliana NP_200835 Arabidopsis thaliana NP_200836 Arabidopsis thaliana NP_200838 Arabidopsis thaliana NP_200839 Arabidopsis thaliana NP_200840 Arabidopsis thaliana NP_567233 Arabidopsis thaliana NP_567234 Arabidopsis thaliana NP_851230 Arabidopsis thaliana NP_001047547 Oryza sativa Japonica Group NP_001049606 Oryza sativa Japonica Group NP_001051739 Oryza sativa Japonica Group NP_001053396 Oryza sativa Japonica Group NP_001053397 Oryza sativa Japonica Group NP_001058819 Oryza sativa Japonica Group NP_001058820 Oryza sativa Japonica Group NP_001058821 Oryza sativa Japonica Group NP_001058822 Oryza sativa Japonica Group NP_001058823 Oryza sativa Japonica Group NP_001058824 Oryza sativa Japonica Group NP_001058825 Oryza sativa Japonica Group NP_001058826 Oryza sativa Japonica Group NP_001058828 Oryza sativa Japonica Group NP_001058829 Oryza sativa Japonica Group NP_001058830 Oryza sativa Japonica Group NP_001058833 Oryza sativa Japonica Group NP_001060079 Oryza sativa Japonica Group NP_001060080 Oryza sativa Japonica Group NP_001064693 Oryza sativa Japonica Group NP_001064694 Oryza sativa Japonica Group NP_001067102 Oryza sativa Japonica Group gw1.293.39.1 Physcomitrella patens subsp. patens 27751.m000173 Ricinus communis 28345.m000115 Ricinus communis 29008.m000036 Ricinus communis 29008.m000037 Ricinus communis 29751.m001876 Ricinus communis 29751.m001887 Ricinus communis 29751.m001888 Ricinus communis 29751.m001890 Ricinus communis 29751.m001891 Ricinus communis 30143.m001168 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF49899 2.3E-75 35 277 IPR008985 Concanavalin A-like lectin/glucanases superfamily Pfam PF00139 3.7E-81 38 259 IPR001220 Legume lectin domain PANTHER PTHR24420 0.0 135 657 No hit NA ProSitePatterns PS00307 NA 136 142 IPR019825 Legume lectin, beta chain, Mn/Ca-binding site SUPERFAMILY SSF56112 4.1E-78 325 623 IPR011009 Protein kinase-like domain ProSiteProfiles PS50011 37.9 344 603 IPR000719 Protein kinase, catalytic domain SMART SM00220 1.3E-40 344 616 IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain Pfam PF00069 5.7E-49 345 548 IPR000719 Protein kinase, catalytic domain ProSitePatterns PS00107 NA 350 374 IPR017441 Protein kinase, ATP binding site ProSitePatterns PS00108 NA 465 477 IPR008271 Serine/threonine-protein kinase, active site