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| Locus name | AT1G57630 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Protein degradation/modification:protein kinase and phosphatases |
| Effect for Senescence | unclear |
| Gene Description | disease resistance protein (TIR class) |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Sequence | AT1G57630.1 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT1G57630.1
miRNA: ath-miR164a
miRNA: ath-miR164a
mfe: -29.9 kcal/mol
p-value: 0.001338
position: 233
target 5' U U U A 3'
UGC C UGUCUUGCU CUCCA
ACG G ACGGGACGA GAGGU
miRNA 3' U C A 5'
target: AT1G57630.1
miRNA: ath-miR164b
miRNA: ath-miR164b
mfe: -29.9 kcal/mol
p-value: 0.003166
position: 233
target 5' U U U A 3'
UGC C UGUCUUGCU CUCCA
ACG G ACGGGACGA GAGGU
miRNA 3' U C A 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_177289 | |
| Cross Link | |
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