|
|
| Locus name | AT2G32660 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Protein degradation/modification:protein kinase and phosphatases |
| Effect for Senescence | unclear |
| Gene Description | disease resistance family protein |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Sequence | AT2G32660.1 | Genomic | mRNA | CDS | Protein
|
|
| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
|
| Details | | target: AT2G32660.1
miRNA: ath-miR413
miRNA: ath-miR413
mfe: -23.3 kcal/mol
p-value: 0.120304
position: 1551
target 5' A U G A 3'
UGUA GAU AAGAGAGGCUAU
ACGU UUG UUCUCUUUGAUA
miRNA 3' C C 5'
target: AT2G32660.1
miRNA: ath-miR832-3p
miRNA: ath-miR832-3p
mfe: -26.4 kcal/mol
p-value: 0.007371
position: 2114
target 5' G C A 3'
UUGUUUGGAUUGG AAUUGG
AACGAACCUAACC UUAGUU
miRNA 3' G C 5'
|
|
| Ortholog Group | |
|
| Ortholog Groups: OG5_130149 | |
| Cross Link | |
|
|
