Basic information
GenBank ID	AF454956
Alias	BoCP1
Organism	Broccoli (Brassica oleracea)
Taxonomic identifier	[NCBI]
Function category	Macromolecule degradation
Effect for Senescence	unclear
Gene Description	The mRNAs encoded by the broccoli cDNAs are expressed in floret tissue during harvest-induced senescence with mRNA accumulating within 6 h of harvest for BoCP1, 12 h of harvest for BoCP4 and within 24 h of harvest for BoCP2 and BoCP3.
Evidence	Molecular evidence:Northern [Ref 1]
References	1: Coupe SA, Sinclair BK, Watson LM, Heyes JA, Eason JR Identification of dehydration-responsive cysteine proteases during post-harvest senescence of broccoli florets. J. Exp. Bot. 2003 Mar;54(384):1045-56
Gene Ontology	biological process proteolysis molecular function cysteine-type peptidase activity
Sequence	AF454956.1 | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12411 3.3E-231 3 428 IPR013128 Peptidase C1A, papain SUPERFAMILY SSF54001 6.2E-114 30 338 No hit NA Pfam PF08246 4.4E-16 37 94 IPR013201 Proteinase inhibitor I29, cathepsin propeptide SMART SM00848 3.0E-24 37 94 IPR013201 Proteinase inhibitor I29, cathepsin propeptide Pfam PF00112 7.1E-85 123 338 IPR000668 Peptidase C1A, papain C-terminal SMART SM00645 1.1E-126 123 338 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 2.0E-10 141 156 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00139 NA 141 152 IPR000169 Cysteine peptidase, cysteine active site ProSitePatterns PS00639 NA 281 291 IPR025660 Cysteine peptidase, histidine active site PRINTS PR00705 2.0E-10 283 293 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 2.0E-10 298 304 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00640 NA 298 317 IPR025661 Cysteine peptidase, asparagine active site SUPERFAMILY SSF57277 4.1E-11 353 387 No hit NA SMART SM00277 5.3E-26 356 413 IPR000118 Granulin Pfam PF00396 5.0E-12 367 414 IPR000118 Granulin