Basic information
Locus name	AT2G36950
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:Metal binding
Effect for Senescence	unclear
Gene Description	heavy-metal-associated domain-containing protein nearly identical to farnesylated protein ATFP2 [GI:4097545] Pfam profile PF00403: Heavy-metal-associated domain
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process metal ion transport molecular function metal ion binding
Sequence	AT2G36950.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_170116	Accession Taxon NP_001031825 Arabidopsis thaliana NP_195958 Arabidopsis thaliana NP_565855 ( AT2G36950 ) Arabidopsis thaliana NP_001048989 Oryza sativa Japonica Group 30078.m002291 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22814 6.7E-190 19 272 No hit NA SUPERFAMILY SSF55008 4.2E-12 52 108 IPR006121 Heavy metal-associated domain, HMA Pfam PF00403 2.7E-14 54 108 IPR006121 Heavy metal-associated domain, HMA ProSiteProfiles PS50846 9.1 58 106 IPR006121 Heavy metal-associated domain, HMA SUPERFAMILY SSF55008 4.2E-10 158 210 IPR006121 Heavy metal-associated domain, HMA Pfam PF00403 2.4E-12 161 218 IPR006121 Heavy metal-associated domain, HMA ProSiteProfiles PS50846 8.5 162 217 IPR006121 Heavy metal-associated domain, HMA
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787