Basic information   
Locus name AT1G22990
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers:Metal binding
Effect for Senescenceunclear
Gene Descriptionheavy-metal-associated domain-containing protein / copper chaperone (CCH)-related low similarity to copper homeostasis factor [GI:3168840][PMID:9701579]; strong similarity to farnesylated protein ATFP7 [GI:4097555]; contains heavy-metal-associated domain PF00403
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
biological process
molecular function
SequenceAT1G22990.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_177531
AccessionTaxon
NP_173712 ( AT1G22990 ) Arabidopsis thaliana
NP_177261Arabidopsis thaliana
NP_001043154Oryza sativa Japonica Group
30059.m000470Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR228142.7E-6919126No hitNA
SUPERFAMILYSSF550085.9E-152789IPR006121Heavy metal-associated domain, HMA
PfamPF004034.8E-133589IPR006121Heavy metal-associated domain, HMA
ProSiteProfilesPS5084610.53792IPR006121Heavy metal-associated domain, HMA