Basic information
Locus name	AT3G50770
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction:Calcium
Effect for Senescence	unclear
Gene Description	calmodulin-related protein, putative similar to regulator of gene silencing calmodulin-related protein GI:12963415 from [Nicotiana tabacum]
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	molecular function calcium ion binding
Sequence	AT3G50770.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_170570	Accession Taxon NP_190646 ( AT3G50770 ) Arabidopsis thaliana NP_001044352 Oryza sativa Japonica Group NP_001051396 Oryza sativa Japonica Group 29250.m000235 Ricinus communis 29250.m000236 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10891 1.5E-162 1 205 No hit NA ProSiteProfiles PS50222 14.5 60 95 IPR002048 EF-hand domain SUPERFAMILY SSF47473 1.9E-33 60 203 No hit NA SMART SM00054 3.8E-5 64 92 IPR002048 EF-hand domain Pfam PF13499 1.3E-13 65 125 IPR011992 EF-hand-like domain ProSitePatterns PS00018 NA 73 85 IPR018247 EF-Hand 1, calcium-binding site ProSiteProfiles PS50222 10.3 96 131 IPR002048 EF-hand domain SMART SM00054 0.0 100 128 IPR002048 EF-hand domain ProSitePatterns PS00018 NA 109 121 IPR018247 EF-Hand 1, calcium-binding site SMART SM00054 110.0 141 170 IPR002048 EF-hand domain Pfam PF13833 1.9E-9 155 204 No hit NA ProSiteProfiles PS50222 11.2 174 205 IPR002048 EF-hand domain SMART SM00054 0.1 178 205 IPR002048 EF-hand domain ProSitePatterns PS00018 NA 187 199 IPR018247 EF-Hand 1, calcium-binding site