Basic information   
Locus name AT1G76390
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categorySignal transduction:protein:protein interaction
Effect for Senescenceunclear
Gene Descriptionarmadillo/beta-catenin repeat family protein / U-box domain-containing protein contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
biological process
cellular component
molecular function
SequenceAT1G76390.1 | Genomic | mRNA | CDS | Protein
AT1G76390.2 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_150074
AccessionTaxon
NP_001077833 ( AT1G76390 ) Arabidopsis thaliana
NP_177765Arabidopsis thaliana
NP_564125Arabidopsis thaliana
NP_001050813Oryza sativa Japonica Group
NP_001066565Oryza sativa Japonica Group
e_gw1.124.14.1Physcomitrella patens subsp. patens
e_gw1.3.441.1Physcomitrella patens subsp. patens
e_gw1.3.442.1Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_900161Physcomitrella patens subsp. patens
30170.m014229Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SUPERFAMILYSSF578504.6E-2315105No hitNA
PANTHERPTHR228492.1E-13721783No hitNA
PfamPF045645.3E-1327100IPR003613U box domain
SMARTSM005044.9E-292896IPR003613U box domain
SUPERFAMILYSSF483715.4E-35121439IPR016024Armadillo-type fold
SMARTSM00185160.0135175IPR000225Armadillo
SMARTSM0018535.0177217IPR000225Armadillo
CoilsCoilNA249270No hitNA
SMARTSM00185210.0262302IPR000225Armadillo
SMARTSM0018512.0303342IPR000225Armadillo
SMARTSM00185150.0343388IPR000225Armadillo
SUPERFAMILYSSF483712.4E-21378642IPR016024Armadillo-type fold
SMARTSM00185140.0442484IPR000225Armadillo
SMARTSM0018515.0588629IPR000225Armadillo
ProSiteProfilesPS501768.5598633IPR000225Armadillo
SMARTSM0018525.0671711IPR000225Armadillo
SUPERFAMILYSSF483712.4E-21678797IPR016024Armadillo-type fold
Subcellular Localization   
Localization 1
Localizationcytosol
EvidenceSUBAcon
Pubmed ID23180787
Localization 2
Localizationcytosol,plasma membrane
EvidenceSUBAcon
Pubmed ID23180787