Basic information
Locus name	AT4G21840
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Redox regulation:Antioxidants
Effect for Senescence	unclear
Gene Description	methionine sulfoxide reductase domain-containing protein / SelR domain-containing protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process oxidation-reduction process molecular function peptide-methionine (R)-S-oxide reductase activity
Sequence	AT4G21840.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_127019	Accession Taxon NP_001078422 Arabidopsis thaliana NP_001078423 Arabidopsis thaliana NP_001117484 Arabidopsis thaliana NP_192390 Arabidopsis thaliana NP_192392 Arabidopsis thaliana NP_192393 Arabidopsis thaliana NP_193915 ( AT4G21840 ) Arabidopsis thaliana NP_564640 Arabidopsis thaliana NP_567271 Arabidopsis thaliana NP_567637 Arabidopsis thaliana NP_567638 Arabidopsis thaliana NP_567639 Arabidopsis thaliana CMP201C Cyanidioschyzon merolae strain 10D 106339 Chlamydomonas reinhardtii 116803 Chlamydomonas reinhardtii 117208 Chlamydomonas reinhardtii 193479 Chlamydomonas reinhardtii ACO64564 Micromonas sp. RCC299 ACO68140 Micromonas sp. RCC299 NP_001050156 Oryza sativa Japonica Group NP_001055501 Oryza sativa Japonica Group NP_001057620 Oryza sativa Japonica Group e_gw1.13.00.311.1 Ostreococcus tauri gw1.01.00.541.1 Ostreococcus tauri e_gw1.317.24.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_1440019 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_280000001 Physcomitrella patens subsp. patens 29726.m003941 Ricinus communis 29804.m001509 Ricinus communis e_gw1.2.690.1 Thalassiosira pseudonana CCMP1335 e_gw1.4.666.1 Thalassiosira pseudonana CCMP1335 XP_002945685 Volvox carteri f. nagariensis XP_002953998 Volvox carteri f. nagariensis XP_002957178 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10173 8.0E-65 9 140 No hit NA SUPERFAMILY SSF51316 1.5E-47 15 140 IPR011057 Mss4-like TIGRFAM TIGR00357 1.8E-38 16 140 IPR002579 Peptide methionine sulphoxide reductase MrsB Pfam PF01641 1.2E-51 18 138 IPR002579 Peptide methionine sulphoxide reductase MrsB
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787