Basic information   
Locus name AT3G13810
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryTranscription regulation:C2H2
Effect for Senescenceunclear
Gene Descriptionzinc finger (C2H2 type) family protein similar to finger protein pcp1 GB:S48856 from
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
molecular function
SequenceAT3G13810.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_175997
AccessionTaxon
NP_175907Arabidopsis thaliana
NP_187997 ( AT3G13810 ) Arabidopsis thaliana
NP_001042288Oryza sativa Japonica Group
28694.m000662Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR105932.6E-14066477No hitNA
PfamPF121716.5E-598121IPR022755Zinc finger, double-stranded RNA binding
SUPERFAMILYSSF576673.7E-698121No hitNA
ProSiteProfilesPS5015710.999121IPR007087Zinc finger, C2H2
SMARTSM003550.099121IPR015880Zinc finger, C2H2-like
ProSitePatternsPS00028NA101121IPR007087Zinc finger, C2H2
SMARTSM00355240.0141171IPR015880Zinc finger, C2H2-like
SUPERFAMILYSSF576673.7E-6171196No hitNA
SMARTSM00355180.0176196IPR015880Zinc finger, C2H2-like