Basic information   
Locus name AT4G22820
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers:zinc finger protein
Effect for Senescenceunclear
Gene Descriptionzinc finger (AN1-like) family protein contains Pfam domains, PF01428: AN1-like Zinc finger
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
molecular function
SequenceAT4G22820.1 | Genomic | mRNA | CDS | Protein
AT4G22820.2 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_127624
AccessionTaxon
NP_001077694Arabidopsis thaliana
NP_172706Arabidopsis thaliana
NP_180326Arabidopsis thaliana
NP_190848Arabidopsis thaliana
NP_192941Arabidopsis thaliana
NP_194013Arabidopsis thaliana
NP_564585Arabidopsis thaliana
NP_565844Arabidopsis thaliana
NP_849364Arabidopsis thaliana
NP_849652Arabidopsis thaliana
NP_974594 ( AT4G22820 ) Arabidopsis thaliana
CMT430CCyanidioschyzon merolae strain 10D
195485Chlamydomonas reinhardtii
NP_001044076Oryza sativa Japonica Group
NP_001046186Oryza sativa Japonica Group
NP_001047019Oryza sativa Japonica Group
NP_001051527Oryza sativa Japonica Group
NP_001051528Oryza sativa Japonica Group
NP_001051530Oryza sativa Japonica Group
NP_001058066Oryza sativa Japonica Group
NP_001058985Oryza sativa Japonica Group
e_gw1.50.114.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_2520009Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_230008Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1300111Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1380060Physcomitrella patens subsp. patens
gw1.23.189.1Physcomitrella patens subsp. patens
29625.m000680Ricinus communis
29820.m000982Ricinus communis
30055.m001539Ricinus communis
30147.m014170Ricinus communis
30169.m006412Ricinus communis
estExt_fgenesh1_pg.C_chr_70212Thalassiosira pseudonana CCMP1335
fgenesh1_pg.C_chr_1000779Thalassiosira pseudonana CCMP1335
XP_002955258Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106343.2E-741176No hitNA
ProSiteProfilesPS510369.91650IPR002653Zinc finger, A20-type
PfamPF017541.4E-101943IPR002653Zinc finger, A20-type
SMARTSM002592.3E-91943IPR002653Zinc finger, A20-type
SUPERFAMILYSSF577161.4E-122168No hitNA
SUPERFAMILYSSF1183102.0E-28103171No hitNA
ProSiteProfilesPS5103912.4114157IPR000058Zinc finger, AN1-type
PfamPF014281.9E-11117155IPR000058Zinc finger, AN1-type
SMARTSM001541.1E-17117154IPR000058Zinc finger, AN1-type