|
Locus name | AT4G24230 |
Alias | ACBP3 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Nutrient recycling |
Effect for Senescence | promote |
Gene Description | encodes acyl-CoA binding protein |
Evidence | Genetic evidence:Mutant and transgene [Ref 1] |
References | 1: Xiao S, Gao W, Chen QF, Chan SW, Zheng SX, Ma J, Wang M, Welti R, Chye MLOverexpression of Arabidopsis acyl-CoA binding protein ACBP3 promotes starvation-induced and age-dependent leaf senescence.Plant Cell 2010 May;22(5):1463-82 |
Gene Ontology | |
Sequence | AT4G24230.1 | Genomic | mRNA | CDS | Protein AT4G24230.2 | Genomic | mRNA | CDS | Protein AT4G24230.3 | Genomic | mRNA | CDS | Protein AT4G24230.4 | Genomic | mRNA | CDS | Protein AT4G24230.5 | Genomic | mRNA | CDS | Protein AT4G24230.6 | Genomic | mRNA | CDS | Protein
|
|
Mutated 1 | Mutant name |
ACBP3OE | Mutant/Transgenic |
transgenic | Ecotype |
Col-0 |
Mutagenesis type |
transgene |
|
Mutated 2 | Mutant name |
acbp3 | Mutant/Transgenic |
mutant | Ecotype |
Col-0 |
Mutagenesis type |
T-DNA insertion_knock out |
|
Mutated 3 | Mutant name |
ACBP3-GFP | Mutant/Transgenic |
transgenic | Ecotype |
Col-0 |
Mutagenesis type |
transgene |
|
Mutated 4 | Mutant name |
ACBP3deltaSS-GFP | Mutant/Transgenic |
transgenic | Ecotype |
Col-0 |
Mutagenesis type |
transgene |
|
Mutated 5 | Mutant name |
ACBP3-RNAi | Mutant/Transgenic |
transgenic | Ecotype |
Col-0 |
Mutagenesis type |
RNAi |
|
miRNA Interaction | |
|
Details | | target: AT4G24230.1 miRNA: ath-miR157d miRNA: ath-miR157d mfe: -24.7 kcal/mol p-value: 0.014667
position: 105 target 5' U U U C 3' UGCUCUC UGUUUUCU UC ACGAGAG AUAGAAGA AG miRNA 3' C C U 5'
target: AT4G24230.2 miRNA: ath-miR157d miRNA: ath-miR157d mfe: -24.7 kcal/mol p-value: 0.015073
position: 130 target 5' U U U C 3' UGCUCUC UGUUUUCU UC ACGAGAG AUAGAAGA AG miRNA 3' C C U 5'
target: AT4G24230.3 miRNA: ath-miR157d miRNA: ath-miR157d mfe: -24.7 kcal/mol p-value: 0.012035
position: 54 target 5' U U U C 3' UGCUCUC UGUUUUCU UC ACGAGAG AUAGAAGA AG miRNA 3' C C U 5'
target: AT4G24230.4 miRNA: ath-miR157d miRNA: ath-miR157d mfe: -24.7 kcal/mol p-value: 0.011282
position: 51 target 5' U U U C 3' UGCUCUC UGUUUUCU UC ACGAGAG AUAGAAGA AG miRNA 3' C C U 5'
target: AT4G24230.5 miRNA: ath-miR157d miRNA: ath-miR157d mfe: -24.7 kcal/mol p-value: 0.010333
position: 52 target 5' U U U C 3' UGCUCUC UGUUUUCU UC ACGAGAG AUAGAAGA AG miRNA 3' C C U 5'
target: AT4G24230.6 miRNA: ath-miR157d miRNA: ath-miR157d mfe: -24.7 kcal/mol p-value: 0.011235
position: 38 target 5' U U U C 3' UGCUCUC UGUUUUCU UC ACGAGAG AUAGAAGA AG miRNA 3' C C U 5'
|
|
Ortholog Group | |
|
Ortholog Groups: OG5_156352 | |
Cross Link | |
|
|
|
Localization | extracellular |
Evidence | SUBAcon |
Pubmed ID | 23180787 |