Basic information   
Locus name AT3G21250
AliasMRP6
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers:unclear
Effect for Senescenceunclear
Gene Descriptionmember of MRP subfamily.MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6 (MRP6)
EvidenceMolecular evidence:cDNA library [Ref 1]
References
1: Y.GUO, Z.CAI, S.GAN.
Transcriptome of Arabidopsis leaf senescence.
Plant, Cell & Environment 2004, 27(5):521-549.

Gene Ontology
biological process
cellular component
molecular function
SequenceAT3G21250.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
miRNA Interaction      
Details
target: AT3G21250.1 
miRNA: ath-miR398a
miRNA: ath-miR398a
mfe: -28.3 kcal/mol 
p-value: 0.038590 

position:  3084 
target 5' G   U      U          G G 3' 
           GAG GGGUGA UUUGAGGAUA A  
           UUC CCCACU GGACUCUUGU U  
miRNA  3'                       G   5' 

target: AT3G21250.1 
miRNA: ath-miR837-5p
miRNA: ath-miR837-5p
mfe: -22.6 kcal/mol 
p-value: 0.165545 

position:  3477 
target 5' C                G  A 3' 
           GGGA GGACGGGAAGC GA  
           CUUU CUUGUUCUUUG CU  
miRNA  3' A    G           A  A 5' 

target: AT3G21250.1 
miRNA: ath-miR865-3p
miRNA: ath-miR865-3p
mfe: -25.7 kcal/mol 
p-value: 0.006719 

position:  3087 
target 5' G       U        U   G 3' 
           UGGGUGA UUUGAGGA AGA  
           ACCUAUU AAACUCCU UUU  
miRNA  3' A       U        U     5' 
Ortholog Group      
Ortholog Groups: OG5_126561
AccessionTaxon
NP_001031116Arabidopsis thaliana
NP_171908Arabidopsis thaliana
NP_174329Arabidopsis thaliana
NP_174330Arabidopsis thaliana
NP_174331Arabidopsis thaliana
NP_178811Arabidopsis thaliana
NP_181013Arabidopsis thaliana
NP_182301Arabidopsis thaliana
NP_187915Arabidopsis thaliana
NP_187916Arabidopsis thaliana
NP_187917Arabidopsis thaliana
NP_188762 ( AT3G21250 ) Arabidopsis thaliana
NP_191473Arabidopsis thaliana
NP_191575Arabidopsis thaliana
NP_191656Arabidopsis thaliana
NP_191829Arabidopsis thaliana
NP_850575Arabidopsis thaliana
NP_974299Arabidopsis thaliana
NP_974300Arabidopsis thaliana
CMN251CCyanidioschyzon merolae strain 10D
134058Chlamydomonas reinhardtii
143900Chlamydomonas reinhardtii
190380Chlamydomonas reinhardtii
54676Chlamydomonas reinhardtii
ACO60871Micromonas sp. RCC299
ACO69477Micromonas sp. RCC299
NP_001042159Oryza sativa Japonica Group
NP_001043000Oryza sativa Japonica Group
NP_001046583Oryza sativa Japonica Group
NP_001046585Oryza sativa Japonica Group
NP_001048934Oryza sativa Japonica Group
NP_001052251Oryza sativa Japonica Group
NP_001052252Oryza sativa Japonica Group
NP_001053695Oryza sativa Japonica Group
NP_001053696Oryza sativa Japonica Group
NP_001053904Oryza sativa Japonica Group
NP_001054864Oryza sativa Japonica Group
NP_001056870Oryza sativa Japonica Group
NP_001056996Oryza sativa Japonica Group
NP_001065790Oryza sativa Japonica Group
NP_001067031Oryza sativa Japonica Group
e_gw1.03.00.16.1Ostreococcus tauri
e_gw1.07.00.6.1Ostreococcus tauri
e_gw1.121.4.1Physcomitrella patens subsp. patens
e_gw1.136.12.1Physcomitrella patens subsp. patens
e_gw1.21.192.1Physcomitrella patens subsp. patens
e_gw1.227.2.1Physcomitrella patens subsp. patens
e_gw1.402.38.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_1220086Physcomitrella patens subsp. patens
estExt_Genewise1.C_2230056Physcomitrella patens subsp. patens
estExt_Genewise1.C_2930039Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_1420018Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1050058Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2240079Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_3520041Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_518000010Physcomitrella patens subsp. patens
fgenesh1_pm.scaffold_540000001Physcomitrella patens subsp. patens
28694.m000689Ricinus communis
29337.m000213Ricinus communis
29337.m000214Ricinus communis
29337.m000216Ricinus communis
29637.m000727Ricinus communis
29929.m004739Ricinus communis
29932.m000603Ricinus communis
29932.m000604Ricinus communis
29983.m003220Ricinus communis
29986.m001594Ricinus communis
30131.m006854Ricinus communis
30169.m006551Ricinus communis
30869.m000035Ricinus communis
e_gw1.23.1.1Thalassiosira pseudonana CCMP1335
e_gw1.4.10.1Thalassiosira pseudonana CCMP1335
estExt_gwp_gw1.C_chr_40418Thalassiosira pseudonana CCMP1335
estExt_gwp_gw1.C_chr_70405Thalassiosira pseudonana CCMP1335
fgenesh1_pg.C_bd_13x1000026Thalassiosira pseudonana CCMP1335
gw1.13.6.1Thalassiosira pseudonana CCMP1335
thaps1_ua_kg.chr_23000014Thalassiosira pseudonana CCMP1335
XP_002946948Volvox carteri f. nagariensis
XP_002950646Volvox carteri f. nagariensis
XP_002951320Volvox carteri f. nagariensis
XP_002952511Volvox carteri f. nagariensis
XP_002957801Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR242230.011287No hitNA
SUPERFAMILYSSF901233.5E-33112419IPR011527ABC transporter, transmembrane domain, type 1
ProSiteProfilesPS5092933.0124405IPR017940ABC transporter, integral membrane type 1
PfamPF006641.5E-29125392IPR001140ABC transporter, transmembrane domain
ProSiteProfilesPS5089320.1441651IPR003439ABC transporter-like
SUPERFAMILYSSF525408.8E-51445651IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM003825.0E-13466654IPR003593AAA+ ATPase domain
PfamPF000055.3E-15481591IPR003439ABC transporter-like
ProSitePatternsPS00211NA564578IPR017871ABC transporter, conserved site
SUPERFAMILYSSF901231.3E-447171027IPR011527ABC transporter, transmembrane domain, type 1
ProSiteProfilesPS5092929.87341008IPR017940ABC transporter, integral membrane type 1
PfamPF006644.1E-18746994IPR001140ABC transporter, transmembrane domain
SUPERFAMILYSSF525405.1E-6710351278IPR027417P-loop containing nucleoside triphosphate hydrolase
ProSiteProfilesPS5089317.110451279IPR003439ABC transporter-like
SMARTSM003821.2E-1210711264IPR003593AAA+ ATPase domain
PfamPF000055.8E-1710861210IPR003439ABC transporter-like
Subcellular Localization   
Localizationplasma membrane
EvidenceSUBAcon
Pubmed ID23180787