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Locus name | GRMZM2G340065 |
Organism | Maize (Zea mays) | Taxonomic identifier | [NCBI] | Function category | protein.degradation.cysteine protease | Effect for Senescence | unclear | Gene Description | Expression level was up-regulated at 18 DAA (Day After Anthesis)or later. | Evidence | Genomic evidence:microarray data [Ref 1] | References | 1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SMTranscriptional and metabolic analysis of senescence induced by preventing pollination in maize.Plant Physiol. 2012 Aug;159(4):1730-44 | Gene Ontology | | Sequence | GRMZM2G340065_T01 | Genomic | mRNA | CDS | Protein
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| Database | Entry ID | E-value | Start | End | InterPro ID | Description | PANTHER | PTHR12411 | 1.2E-241 | 39 | 515 | IPR013128 | Peptidase C1A, papain | SUPERFAMILY | SSF54001 | 3.7E-114 | 101 | 415 | No hit | NA | Pfam | PF08246 | 2.9E-14 | 109 | 167 | IPR013201 | Proteinase inhibitor I29, cathepsin propeptide | SMART | SM00848 | 7.4E-25 | 109 | 167 | IPR013201 | Proteinase inhibitor I29, cathepsin propeptide | Pfam | PF00112 | 1.7E-86 | 199 | 415 | IPR000668 | Peptidase C1A, papain C-terminal | SMART | SM00645 | 4.2E-125 | 199 | 415 | IPR000668 | Peptidase C1A, papain C-terminal | PRINTS | PR00705 | 3.2E-10 | 217 | 232 | IPR000668 | Peptidase C1A, papain C-terminal | ProSitePatterns | PS00139 | NA | 217 | 228 | IPR000169 | Cysteine peptidase, cysteine active site | ProSitePatterns | PS00639 | NA | 358 | 368 | IPR025660 | Cysteine peptidase, histidine active site | PRINTS | PR00705 | 3.2E-10 | 360 | 370 | IPR000668 | Peptidase C1A, papain C-terminal | PRINTS | PR00705 | 3.2E-10 | 375 | 381 | IPR000668 | Peptidase C1A, papain C-terminal | ProSitePatterns | PS00640 | NA | 375 | 394 | IPR025661 | Cysteine peptidase, asparagine active site | SUPERFAMILY | SSF57277 | 1.1E-9 | 440 | 473 | No hit | NA | SMART | SM00277 | 1.6E-28 | 442 | 499 | IPR000118 | Granulin | Pfam | PF00396 | 7.4E-12 | 453 | 500 | IPR000118 | Granulin |
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