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About
Basic information
Locus name
GRMZM2G127147
Organism
Maize (
Zea mays
)
Taxonomic identifier
[NCBI]
Function category
minor CHO metabolism.raffinose family.raffinose synthases.putative
Effect for Senescence
unclear
Gene Description
Expression level was up-regulated at 18 DAA (Day After Anthesis)or later.
Evidence
Genomic evidence:microarray data [Ref 1]
References
1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SM
Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize.
Plant Physiol. 2012 Aug;159(4):1730-44
Gene Ontology
molecular function
ATP binding
nucleoside-triphosphatase activity
nucleotide binding
Sequence
GRMZM2G127147_T01 |
Genomic
|
mRNA
|
CDS
|
Protein
GRMZM2G127147_T02 |
Genomic
|
mRNA
|
CDS
|
Protein
GRMZM2G127147_T03 |
Genomic
|
mRNA
|
CDS
|
Protein
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR23074
9.9E-219
39
361
No hit
NA
SUPERFAMILY
SSF52540
3.0E-61
72
358
IPR027417
P-loop containing nucleoside triphosphate hydrolase
SMART
SM00382
2.4E-17
109
252
IPR003593
AAA+ ATPase domain
Pfam
PF00004
5.1E-39
113
250
IPR003959
ATPase, AAA-type, core
ProSitePatterns
PS00674
NA
222
241
IPR003960
ATPase, AAA-type, conserved site
Pfam
PF09336
1.3E-7
314
359
IPR015415
Vps4 oligomerisation, C-terminal