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About
Basic information
Locus name
GRMZM2G094811
Organism
Maize (
Zea mays
)
Taxonomic identifier
[NCBI]
Function category
cell wall.degradation.pectate lyases and polygalacturonases
Effect for Senescence
unclear
Gene Description
Expression level was up-regulated at 18 DAA (Day After Anthesis)or later.
Evidence
Genomic evidence:microarray data [Ref 1]
References
1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SM
Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize.
Plant Physiol. 2012 Aug;159(4):1730-44
Gene Ontology
biological process
regulation of transcription, DNA-dependent
molecular function
sequence-specific DNA binding transcription factor activity
Sequence
GRMZM2G094811_T01 |
Genomic
|
mRNA
|
CDS
|
Protein
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR31677
8.3E-27
181
273
No hit
NA
Pfam
PF00847
1.5E-17
216
265
IPR001471
AP2/ERF domain
ProSiteProfiles
PS51032
24.7
216
273
IPR001471
AP2/ERF domain
SMART
SM00380
4.8E-38
216
279
IPR001471
AP2/ERF domain
SUPERFAMILY
SSF54171
4.6E-22
216
274
IPR016177
DNA-binding, integrase-type
PRINTS
PR00367
2.4E-11
217
228
IPR001471
AP2/ERF domain
PRINTS
PR00367
2.4E-11
239
255
IPR001471
AP2/ERF domain