Basic information
Locus name	GRMZM2G065585
Organism	Maize (Zea mays)
Taxonomic identifier	[NCBI]
Function category	"misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase"
Effect for Senescence	unclear
Gene Description	Expression level was up-regulated at 18 DAA (Day After Anthesis)or later.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SM Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize. Plant Physiol. 2012 Aug;159(4):1730-44
Gene Ontology	biological process oxidation-reduction process molecular function metal ion binding oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Pathway	KEGG map00591 (EC 1.13.11.12) map00592 (EC 1.13.11.12) MetaCyc PWY-5410
Sequence	GRMZM2G065585_T01 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: GRMZM2G065585_T01  miRNA: zma-miR169a-3p miRNA: zma-miR169a-3p mfe: -31.5 kcal/mol  p-value: 0.001202  position: 855  target 5' C   U            G   G  3'             GUG CCGAGAGCGGCU GCC                 CAU GGUUCUUGUUGA CGG      miRNA  3' A   C            A      5'  target: GRMZM2G065585_T01  miRNA: zma-miR169b-3p miRNA: zma-miR169b-3p mfe: -31.5 kcal/mol  p-value: 0.002097  position: 855  target 5' C   U            G   G  3'             GUG CCGAGAGCGGCU GCC                 CAU GGUUCUUGUUGA CGG      miRNA  3' A   C            A      5'
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11771 0.0 1 697 IPR000907 Lipoxygenase ProSiteProfiles PS51393 317.3 1 697 IPR013819 Lipoxygenase, C-terminal SUPERFAMILY SSF48484 4.7E-276 1 697 IPR013819 Lipoxygenase, C-terminal Pfam PF00305 6.2E-294 2 674 IPR013819 Lipoxygenase, C-terminal PRINTS PR00468 4.0E-70 28 44 IPR001246 Lipoxygenase, plant PRINTS PR00468 4.0E-70 59 78 IPR001246 Lipoxygenase, plant PRINTS PR00468 4.0E-70 127 148 IPR001246 Lipoxygenase, plant PRINTS PR00468 4.0E-70 176 192 IPR001246 Lipoxygenase, plant PRINTS PR00468 4.0E-70 215 234 IPR001246 Lipoxygenase, plant PRINTS PR00468 4.0E-70 282 306 IPR001246 Lipoxygenase, plant PRINTS PR00087 4.4E-23 329 346 IPR013819 Lipoxygenase, C-terminal PRINTS PR00087 4.4E-23 347 364 IPR013819 Lipoxygenase, C-terminal ProSitePatterns PS00711 NA 347 361 IPR020833 Lipoxygenase, iron binding site PRINTS PR00087 4.4E-23 367 387 IPR013819 Lipoxygenase, C-terminal PRINTS PR00468 4.0E-70 604 618 IPR001246 Lipoxygenase, plant