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About
Basic information
Locus name
GRMZM2G058095
Organism
Maize (
Zea mays
)
Taxonomic identifier
[NCBI]
Function category
secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase
Effect for Senescence
unclear
Gene Description
Expression level was up-regulated at 18 DAA (Day After Anthesis)or later.
Evidence
Genomic evidence:microarray data [Ref 1]
References
1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SM
Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize.
Plant Physiol. 2012 Aug;159(4):1730-44
Gene Ontology
biological process
transmembrane transport
transport
cellular component
integral to membrane
molecular function
ATP binding
ATPase activity, coupled to transmembrane movement of substances
ATPase activity
Sequence
GRMZM2G058095_T01 |
Genomic
|
mRNA
|
CDS
|
Protein
GRMZM2G058095_T02 |
Genomic
|
mRNA
|
CDS
|
Protein
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR24223
0.0
40
1475
No hit
NA
SUPERFAMILY
SSF90123
2.6E-34
291
591
IPR011527
ABC transporter, transmembrane domain, type 1
ProSiteProfiles
PS50929
32.6
295
577
IPR017940
ABC transporter, integral membrane type 1
Pfam
PF00664
4.0E-26
315
564
IPR001140
ABC transporter, transmembrane domain
SUPERFAMILY
SSF52540
3.2E-56
610
833
IPR027417
P-loop containing nucleoside triphosphate hydrolase
ProSiteProfiles
PS50893
22.9
613
834
IPR003439
ABC transporter-like
SMART
SM00382
6.6E-14
638
811
IPR003593
AAA+ ATPase domain
Pfam
PF00005
4.3E-15
653
763
IPR003439
ABC transporter-like
ProSitePatterns
PS00211
NA
736
750
IPR017871
ABC transporter, conserved site
SUPERFAMILY
SSF90123
1.1E-48
916
1218
IPR011527
ABC transporter, transmembrane domain, type 1
ProSiteProfiles
PS50929
34.0
920
1195
IPR017940
ABC transporter, integral membrane type 1
Pfam
PF00664
1.0E-24
931
1180
IPR001140
ABC transporter, transmembrane domain
SUPERFAMILY
SSF52540
3.6E-65
1222
1464
IPR027417
P-loop containing nucleoside triphosphate hydrolase
ProSiteProfiles
PS50893
18.1
1232
1466
IPR003439
ABC transporter-like
SMART
SM00382
1.8E-10
1258
1443
IPR003593
AAA+ ATPase domain
Pfam
PF00005
4.6E-18
1273
1397
IPR003439
ABC transporter-like