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About
Basic information
Locus name
GRMZM2G048836
Organism
Maize (
Zea mays
)
Taxonomic identifier
[NCBI]
Function category
protein.degradation.metalloprotease
Effect for Senescence
unclear
Gene Description
Expression level was up-regulated at 18 DAA (Day After Anthesis)or later.
Evidence
Genomic evidence:microarray data [Ref 1]
References
1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SM
Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize.
Plant Physiol. 2012 Aug;159(4):1730-44
Gene Ontology
molecular function
nucleic acid binding
Sequence
GRMZM2G048836_T01 |
Genomic
|
mRNA
|
CDS
|
Protein
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR24011
2.3E-197
48
781
No hit
NA
SUPERFAMILY
SSF54928
8.1E-33
195
359
No hit
NA
ProSiteProfiles
PS50102
14.5
198
271
IPR000504
RNA recognition motif domain
SMART
SM00360
4.8E-13
199
267
IPR000504
RNA recognition motif domain
Pfam
PF00076
8.8E-12
200
264
IPR000504
RNA recognition motif domain
ProSiteProfiles
PS50102
14.8
283
356
IPR000504
RNA recognition motif domain
SMART
SM00360
9.9E-15
284
352
IPR000504
RNA recognition motif domain
Pfam
PF00076
3.8E-12
285
350
IPR000504
RNA recognition motif domain
Pfam
PF04059
1.8E-53
683
779
IPR007201
RNA recognition motif 2
SMART
SM00360
0.9
685
761
IPR000504
RNA recognition motif domain
SUPERFAMILY
SSF54928
2.6E-16
685
769
No hit
NA