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About
Basic information
Locus name
GRMZM2G002131
Organism
Maize (
Zea mays
)
Taxonomic identifier
[NCBI]
Function category
stress.abiotic.heat
Effect for Senescence
unclear
Gene Description
Expression level was up-regulated at 18 DAA (Day After Anthesis)or later.
Evidence
Genomic evidence:microarray data [Ref 1]
References
1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SM
Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize.
Plant Physiol. 2012 Aug;159(4):1730-44
Gene Ontology
cellular component
membrane
molecular function
ATP binding
ATPase activity
Sequence
GRMZM2G002131_T01 |
Genomic
|
mRNA
|
CDS
|
Protein
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
ProSiteProfiles
PS50893
11.3
51
347
IPR003439
ABC transporter-like
SUPERFAMILY
SSF52540
1.1E-25
62
145
IPR027417
P-loop containing nucleoside triphosphate hydrolase
SMART
SM00382
2.0E-5
76
291
IPR003593
AAA+ ATPase domain
Pfam
PF00005
1.2E-5
91
252
IPR003439
ABC transporter-like
SUPERFAMILY
SSF52540
1.1E-25
197
320
IPR027417
P-loop containing nucleoside triphosphate hydrolase
ProSitePatterns
PS00211
NA
228
242
IPR017871
ABC transporter, conserved site
PANTHER
PTHR19241
0.0
279
1239
No hit
NA
Pfam
PF01061
1.3E-39
385
596
IPR013525
ABC-2 type transporter
Pfam
PF08370
2.2E-19
601
665
IPR013581
Plant PDR ABC transporter associated
ProSiteProfiles
PS50893
13.9
738
981
IPR003439
ABC transporter-like
SUPERFAMILY
SSF52540
7.9E-36
751
963
IPR027417
P-loop containing nucleoside triphosphate hydrolase
SMART
SM00382
2.2E-9
765
957
IPR003593
AAA+ ATPase domain
Pfam
PF00005
9.5E-10
780
908
IPR003439
ABC transporter-like
Pfam
PF01061
3.9E-40
1007
1177
IPR013525
ABC-2 type transporter