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About
Basic information
Locus name
GRMZM2G001645
Organism
Maize (
Zea mays
)
Taxonomic identifier
[NCBI]
Function category
secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase
Effect for Senescence
unclear
Gene Description
Expression level was up-regulated at 18 DAA (Day After Anthesis)or later.
Evidence
Genomic evidence:microarray data [Ref 1]
References
1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SM
Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize.
Plant Physiol. 2012 Aug;159(4):1730-44
Gene Ontology
biological process
regulation of transcription, DNA-dependent
molecular function
sequence-specific DNA binding transcription factor activity
Sequence
GRMZM2G001645_T01 |
Genomic
|
mRNA
|
CDS
|
Protein
GRMZM2G001645_T02 |
Genomic
|
mRNA
|
CDS
|
Protein
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR31190
6.5E-27
181
251
No hit
NA
Pfam
PF00847
1.4E-17
192
241
IPR001471
AP2/ERF domain
ProSiteProfiles
PS51032
24.7
192
249
IPR001471
AP2/ERF domain
SMART
SM00380
4.8E-38
192
255
IPR001471
AP2/ERF domain
SUPERFAMILY
SSF54171
4.3E-22
192
250
IPR016177
DNA-binding, integrase-type
PRINTS
PR00367
2.2E-11
193
204
IPR001471
AP2/ERF domain
PRINTS
PR00367
2.2E-11
215
231
IPR001471
AP2/ERF domain