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About
Basic information
Locus name
AC182482.3_FG003
Organism
Maize (
Zea mays
)
Taxonomic identifier
[NCBI]
Function category
transport.metal
Effect for Senescence
unclear
Gene Description
Expression level was up-regulated at 18 DAA (Day After Anthesis)or later.
Evidence
Genomic evidence:microarray data [Ref 1]
References
1: Sekhon RS, Childs KL, Santoro N, Foster CE, Buell CR, de Leon N, Kaeppler SM
Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize.
Plant Physiol. 2012 Aug;159(4):1730-44
Gene Ontology
cellular component
membrane
molecular function
ATP binding
ATPase activity
Sequence
AC182482.3_FGT003 |
Genomic
|
mRNA
|
CDS
|
Protein
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
ProSiteProfiles
PS50893
13.5
110
386
IPR003439
ABC transporter-like
SUPERFAMILY
SSF52540
4.8E-30
122
202
IPR027417
P-loop containing nucleoside triphosphate hydrolase
SMART
SM00382
2.1E-7
135
371
IPR003593
AAA+ ATPase domain
Pfam
PF00005
4.0E-7
150
309
IPR003439
ABC transporter-like
SUPERFAMILY
SSF52540
4.8E-30
254
400
IPR027417
P-loop containing nucleoside triphosphate hydrolase
ProSitePatterns
PS00211
NA
285
299
IPR017871
ABC transporter, conserved site
PANTHER
PTHR19241
0.0
339
1422
No hit
NA
Pfam
PF01061
3.1E-37
465
695
IPR013525
ABC-2 type transporter
Pfam
PF08370
1.1E-20
700
764
IPR013581
Plant PDR ABC transporter associated
ProSiteProfiles
PS50893
14.7
815
1058
IPR003439
ABC transporter-like
SUPERFAMILY
SSF52540
1.7E-36
828
1048
IPR027417
P-loop containing nucleoside triphosphate hydrolase
SMART
SM00382
1.7E-9
842
1034
IPR003593
AAA+ ATPase domain
Pfam
PF00005
8.3E-11
857
985
IPR003439
ABC transporter-like
Pfam
PF01061
3.8E-51
1130
1352
IPR013525
ABC-2 type transporter