Basic information   
Locus name AT5G46960
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers:unclear
Effect for Senescenceunclear
Gene Descriptioninvertase/pectin methylesterase inhibitor family protein
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
molecular function
Pathway
KEGG
MetaCyc
SequenceAT5G46960.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_138764
AccessionTaxon
NP_175863Arabidopsis thaliana
NP_199504Arabidopsis thaliana
NP_199505Arabidopsis thaliana
NP_199508Arabidopsis thaliana
NP_199509Arabidopsis thaliana
NP_199510Arabidopsis thaliana
NP_568672Arabidopsis thaliana
NP_568673 ( AT5G46960 ) Arabidopsis thaliana
NP_001042864Oryza sativa Japonica Group
NP_001045603Oryza sativa Japonica Group
NP_001047782Oryza sativa Japonica Group
NP_001053688Oryza sativa Japonica Group
NP_001053689Oryza sativa Japonica Group
29628.m000775Ricinus communis
29709.m001205Ricinus communis
29739.m003678Ricinus communis
30128.m008856Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR229319.5E-551168No hitNA
TIGRFAMTIGR016141.6E-351174IPR006501Pectinesterase inhibitor
PfamPF040437.7E-2419169IPR006501Pectinesterase inhibitor
SMARTSM008562.6E-3119170IPR006501Pectinesterase inhibitor
SUPERFAMILYSSF1011483.5E-3121174IPR006501Pectinesterase inhibitor