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About
Basic information
Locus name
AT3G25570
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Others:unclear
Effect for Senescence
unclear
Gene Description
adenosylmethionine decarboxylase family protein
Evidence
Molecular evidence:cDNA library [Ref 1]
References
1: Y.GUO, Z.CAI, S.GAN.
Transcriptome of Arabidopsis leaf senescence.
Plant, Cell & Environment 2004, 27(5):521-549.
Gene Ontology
biological process
spermidine biosynthetic process
spermine biosynthetic process
molecular function
adenosylmethionine decarboxylase activity
Pathway
KEGG
map00270
 (EC 4.1.1.50)
map00330
 (EC 4.1.1.50)
Sequence
AT3G25570.1 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_128279
Accession
Taxon
NP_001031888
Arabidopsis thaliana
NP_001078093
Arabidopsis thaliana
NP_001154585
Arabidopsis thaliana
NP_186896
Arabidopsis thaliana
NP_189184
( AT3G25570 )
Arabidopsis thaliana
NP_197099
Arabidopsis thaliana
NP_197394
Arabidopsis thaliana
CMO012C
Cyanidioschyzon merolae strain 10D
183928
Chlamydomonas reinhardtii
NP_001047404
Oryza sativa Japonica Group
NP_001053213
Oryza sativa Japonica Group
NP_001063217
Oryza sativa Japonica Group
fgenesh1_pm.C_Chr_13.0001000010
Ostreococcus tauri
e_gw1.29.159.1
Physcomitrella patens subsp. patens
e_gw1.29.160.1
Physcomitrella patens subsp. patens
estExt_Genewise1.C_3350015
Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1870015
Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2060057
Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2060061
Physcomitrella patens subsp. patens
27772.m000038
Ricinus communis
29673.m000902
Ricinus communis
29726.m003938
Ricinus communis
30138.m003848
Ricinus communis
e_gw1.5.248.1
Thalassiosira pseudonana CCMP1335
XP_002957689
Volvox carteri f. nagariensis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PIRSF
PIRSF001355
3.1E-123
1
343
IPR018167
S-adenosylmethionine decarboxylase subgroup
PANTHER
PTHR11570
1.7E-138
4
335
IPR001985
S-adenosylmethionine decarboxylase
Pfam
PF01536
2.5E-133
4
335
IPR001985
S-adenosylmethionine decarboxylase
TIGRFAM
TIGR00535
1.9E-127
8
336
IPR018167
S-adenosylmethionine decarboxylase subgroup
SUPERFAMILY
SSF56276
2.5E-122
11
335
IPR016067
S-adenosylmethionine decarboxylase, core
ProSitePatterns
PS01336
NA
63
73
IPR018166
S-adenosylmethionine decarboxylase, conserved site