Basic information
Locus name	GSMUA_Achr9G30480_001
Organism	Banana (Musa acuminata)
Taxonomic identifier	[NCBI]
Function category	Transcription factor and regulator
Effect for Senescence	Unclear
Gene Description	Transcription factor jumonji (jmj) family protein / zinc finger
Evidence	Molecular evidence:RNA sequencing [Ref 1]
References	1: D'Hont A, Denoeud F, Aury JM, Baurens FC, Carreel F, Garsmeur O, Noel B, Bocs S, Droc G, Rouard M, Da Silva C, Jabbari K, Cardi C, Poulain J, Souquet M, Labadie K, Jourda C, Lengelle J, Rodier-Goud M, Alberti A, Bernard M, Correa M, Ayyampalayam S, Mckain The banana (Musa acuminata) genome and the evolution of monocotyledonous plants. Nature 2012 Aug 9;488(7410):213-7
Gene Ontology	cellular component nucleus molecular function protein binding
Sequence	GSMUA_Achr9T30480_001 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10694 8.4E-197 96 622 No hit NA SMART SM00545 1.4E-23 109 150 IPR003349 Transcription factor jumonji, JmjN ProSiteProfiles PS51183 18.1 110 151 IPR003349 Transcription factor jumonji, JmjN Pfam PF02375 2.8E-16 111 144 IPR003349 Transcription factor jumonji, JmjN SUPERFAMILY SSF51197 7.7E-38 139 162 No hit NA SUPERFAMILY SSF51197 7.7E-38 204 227 No hit NA SUPERFAMILY SSF51197 7.7E-38 269 496 No hit NA ProSiteProfiles PS51184 39.3 301 472 IPR003347 JmjC domain SMART SM00558 5.7E-63 301 472 IPR003347 JmjC domain Pfam PF02373 3.7E-44 334 455 IPR003347 JmjC domain Pfam PF02928 1.6E-16 562 615 IPR004198 Zinc finger, C5HC2-type ProSiteProfiles PS51542 21.3 684 742 IPR003888 FY-rich, N-terminal Pfam PF05964 1.9E-8 695 741 IPR003888 FY-rich, N-terminal SMART SM00541 7.7E-13 698 742 IPR003888 FY-rich, N-terminal ProSiteProfiles PS51543 25.5 744 834 IPR003889 FY-rich, C-terminal Pfam PF05965 9.4E-23 745 830 IPR003889 FY-rich, C-terminal SMART SM00542 3.3E-26 748 845 IPR003889 FY-rich, C-terminal Coils Coil NA 767 788 No hit NA