Basic information
Locus name	AT5G51640
Alias	YLS7
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:Unknown
Effect for Senescence	unclear
Gene Description	Encodes leaf-senescence-related protein.
Evidence	Molecular evidence:DDRT-PCR [Ref 1]
References	1: Yoshida S, Ito M, Nishida I, Watanabe A Isolation and RNA gel blot analysis of genes that could serve as potential molecular markers for leaf senescence in Arabidopsis thaliana. Plant Cell Physiol. 2001 Feb;42(2):170-8
Sequence	AT5G51640.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT5G51640.1  miRNA: ath-miR169a miRNA: ath-miR169a mfe: -28.8 kcal/mol  p-value: 0.005606  position:  861  target 5' C    A  U               G 3'             UCGG UG GGUCAUCUU GGCUG              AGCC GU UCAGUAGGA CCGAC   miRNA  3'                   A       5'  target: AT5G51640.1  miRNA: ath-miR2938 miRNA: ath-miR2938 mfe: -25.8 kcal/mol  p-value: 0.034660  position:  649  target 5' A   A    G      U U    U 3'             UGG AACC UCUCAG G GAUC              ACC UUGG AGAGUU U CUAG   miRNA  3' G        G      U        5'  target: AT5G51640.1  miRNA: ath-miR778 miRNA: ath-miR778 mfe: -25.2 kcal/mol  p-value: 0.018723  position:  921  target 5' A      A        U      U 3'             UGGUGU AC UAAAC CAAGCU              GCCACA UG AUUUG GUUCGG   miRNA  3'           U            U 5'
Ortholog Group
Ortholog Groups: OG5_164268	Accession Taxon NP_001031712 Arabidopsis thaliana NP_194266 Arabidopsis thaliana NP_199977 ( AT5G51640 ) Arabidopsis thaliana NP_001045183 Oryza sativa Japonica Group e_gw1.424.1.1 Physcomitrella patens subsp. patens 30147.m014176 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF14416 2.1E-22 136 189 IPR025846 PMR5 N-terminal domain PANTHER PTHR32285 2.3E-142 137 498 No hit NA Pfam PF13839 2.9E-65 190 488 IPR026057 PC-Esterase