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Locus name | LOC_Os01g20830 |
Organism | Rice (Oryza sativa) |
Taxonomic identifier | [NCBI] |
Function category | Others:Detoxification |
Effect for Senescence | Unclear |
Gene Description | Heavy metal-associated domain containing protein |
Evidence | Molecular evidence: SSH/Northern blot/RT-PCR [Ref 1] |
References | 1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin YIdentification of early senescence-associated genes in rice flag leaves.Plant Mol. Biol. 2008 May;67(1-2):37-55 |
Gene Ontology | |
Sequence | LOC_Os01g20830.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
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Details | | target: LOC_Os01g20830 miRNA: osa-miR1857-5p miRNA: osa-miR1857-5p mfe: -24.9 kcal/mol p-value: 0.048703
position: 276 target 5' U A U 3' CCUCG GCUUCAGG AAGCUA GGAGU CGAGGUUU UUUGGU miRNA 3' A U 5'
target: LOC_Os01g20830 miRNA: osa-miR2102-3p miRNA: osa-miR2102-3p mfe: -38.0 kcal/mol p-value: 0.005176
position: 646 target 5' G A C 3' GCCG C GAGCCGGCACCAU CGGU G CUUGGCCGUGGUA miRNA 3' G G C C 5'
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Ortholog Group | |
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Ortholog Groups: OG5_242573 | |
Cross Link | |
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