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Locus name | LOC_Os01g10400 |
Organism | Rice (Oryza sativa) | Taxonomic identifier | [NCBI] | Function category | Others:Detoxification | Effect for Senescence | Unclear | Gene Description | Metallothionein, expressed protein | Evidence | Molecular evidence: SSH/Northern blot/RT-PCR [Ref 1] | References | 1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin YIdentification of early senescence-associated genes in rice flag leaves.Plant Mol. Biol. 2008 May;67(1-2):37-55 | Sequence | LOC_Os01g10400.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
| Details | | target: LOC_Os01g10400 miRNA: osa-miR1429-3p miRNA: osa-miR1429-3p mfe: -26.4 kcal/mol p-value: 0.029475
position: 1005 target 5' U G 3' CAACGUAUGAAUUUGUGUGAU GUUGUAUGUUUGGGCACGUUG miRNA 3' 5'
target: LOC_Os01g10400 miRNA: osa-miR1847 miRNA: osa-miR1847 mfe: -26.5 kcal/mol p-value: 0.039426
position: 808 target 5' C A G 3' UGC C CGACUGCAAG UGCG ACG G GUUGACGUUU ACGU miRNA 3' C U G 5'
target: LOC_Os01g10400 miRNA: osa-miR1847 miRNA: osa-miR1847 mfe: -32.9 kcal/mol p-value: 0.002342
position: 156 target 5' A G G 3' GUGC GCAACUGCG ACUGU CACG UGUUGACGU UGACG miRNA 3' G U U 5'
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