Basic information
Locus name	AT3G51430
Alias	YLS2/SSL5
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:strictosidine synthase
Effect for Senescence	unclear
Gene Description	predicted to encode a strictosidine synthase
Evidence	Molecular evidence:DDRT-PCR [Ref 1]; Genomic evidence:microarray data [Ref 2]
References	1: Yoshida S, Ito M, Nishida I, Watanabe A Isolation and RNA gel blot analysis of genes that could serve as potential molecular markers for leaf senescence in Arabidopsis thaliana. Plant Cell Physiol. 2001 Feb;42(2):170-8 2: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process biosynthetic process molecular function strictosidine synthase activity
Sequence	AT3G51430.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_146400	Accession Taxon NP_190710 Arabidopsis thaliana NP_190712 Arabidopsis thaliana NP_190713 Arabidopsis thaliana NP_566951 ( AT3G51430 ) Arabidopsis thaliana NP_001065198 Oryza sativa Japonica Group e_gw1.106.35.1 Physcomitrella patens subsp. patens e_gw1.23.167.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_860100 Physcomitrella patens subsp. patens gw1.11.260.1 Physcomitrella patens subsp. patens 29830.m001423 Ricinus communis 29830.m001424 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10426 8.2E-257 1 371 No hit NA SUPERFAMILY SSF63829 5.2E-48 42 278 No hit NA Pfam PF03088 1.5E-39 161 248 IPR018119 Strictosidine synthase, conserved region SUPERFAMILY SSF63829 5.2E-48 312 361 No hit NA
Subcellular Localization
Localization	endoplasmic reticulum
Evidence	SUBAcon
Pubmed ID	23180787