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Locus name | AT5G19540 |
Organism | Arabidopsis thaliana | Taxonomic identifier | [NCBI] | Function category | Others:unknown | Effect for Senescence | Unclear | Gene Description | unknown protein | Evidence | Molecular evidence: SSH and Northern [Ref 1] | References | 1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani MLarge-scale identification of leaf senescence-associated genes.Plant J. 2003 Dec;36(5):629-42 | Sequence | AT5G19540.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
| Details | | target: AT5G19540.1 miRNA: ath-miR159a miRNA: ath-miR159a mfe: -27.5 kcal/mol p-value: 0.015599
position: 1347 target 5' G U C 3' GGAGCUCU CUUUGGUUCGA UCUCGAGG GAAGUUAGGUU miRNA 3' A U 5'
target: AT5G19540.1 miRNA: ath-miR159b miRNA: ath-miR159b mfe: -27.1 kcal/mol p-value: 0.019153
position: 1346 target 5' U U C 3' GGGAGCUCU CUUUGGUUCGA UUCUCGAGG GAAGUUAGGUU miRNA 3' U 5'
target: AT5G19540.1 miRNA: ath-miR159c miRNA: ath-miR159c mfe: -29.9 kcal/mol p-value: 0.006413
position: 1346 target 5' U U C 3' GGGAGCUCU CUUUGGUUCGA UCCUCGAGG GAAGUUAGGUU miRNA 3' U 5'
target: AT5G19540.1 miRNA: ath-miR319a miRNA: ath-miR319a mfe: -34.3 kcal/mol p-value: 0.001484
position: 1346 target 5' U U C 3' GGGAGCUC UCUUUGGUUCGA CCCUCGAG GGAAGUCAGGUU miRNA 3' U 5'
target: AT5G19540.1 miRNA: ath-miR319b miRNA: ath-miR319b mfe: -34.3 kcal/mol p-value: 0.003024
position: 1346 target 5' U U C 3' GGGAGCUC UCUUUGGUUCGA CCCUCGAG GGAAGUCAGGUU miRNA 3' U 5'
target: AT5G19540.1 miRNA: ath-miR319c miRNA: ath-miR319c mfe: -32.2 kcal/mol p-value: 0.003491
position: 1346 target 5' U U C 3' GGGAGCUC UCUUUGGUUCGA UCCUCGAG GGAAGUCAGGUU miRNA 3' U 5'
target: AT5G19540.1 miRNA: ath-miR869 miRNA: ath-miR869 mfe: -27.1 kcal/mol p-value: 0.011622
position: 149 target 5' C C A U 3' UC GC UAUCUCAAUACCGG AG UG AUAGAGUUGUGGUC miRNA 3' C U U 5'
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Ortholog Group | |
| Ortholog Groups: OG5_156572 | |
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