Basic information
Locus name	AT4G30800
Alias	RPS11B
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	40S ribosomal protein S11 (RPS11B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit; EXPRESSED IN: 23 plant structures;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process translation cellular component intracellular molecular function structural constituent of ribosome
Sequence	AT4G30800.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_126986	Accession Taxon NP_190462 Arabidopsis thaliana NP_194809 ( AT4G30800 ) Arabidopsis thaliana NP_197763 Arabidopsis thaliana CMO287C Cyanidioschyzon merolae strain 10D 180130 Chlamydomonas reinhardtii NP_113122 Guillardia theta ACO62704 Micromonas sp. RCC299 NP_001053235 Oryza sativa Japonica Group NP_001053856 Oryza sativa Japonica Group NP_001060007 Oryza sativa Japonica Group NP_001060008 Oryza sativa Japonica Group NP_001061243 Oryza sativa Japonica Group e_gw1.06.00.398.1 Ostreococcus tauri estExt_fgenesh1_pg.C_300045 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_510169 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_210134 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_790043 Physcomitrella patens subsp. patens 29619.m000251 Ricinus communis 29709.m001197 Ricinus communis estExt_fgenesh1_pg.C_chr_50044 Thalassiosira pseudonana CCMP1335 XP_002947898 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10744 1.2E-109 1 156 IPR000266 Ribosomal protein S17 TIGRFAM TIGR03630 4.4E-34 54 143 IPR019978 Ribosomal protein S17, archaeal Hamap MF_01345_B 13.1 67 146 IPR000266 Ribosomal protein S17 SUPERFAMILY SSF50249 5.6E-29 68 148 IPR012340 Nucleic acid-binding, OB-fold Pfam PF00366 8.5E-30 74 143 IPR000266 Ribosomal protein S17 PRINTS PR00973 1.3E-12 88 111 IPR000266 Ribosomal protein S17 PRINTS PR00973 1.3E-12 121 131 IPR000266 Ribosomal protein S17 ProSitePatterns PS00056 NA 121 133 IPR019979 Ribosomal protein S17, conserved site PRINTS PR00973 1.3E-12 131 138 IPR000266 Ribosomal protein S17
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787