Basic information
Locus name	AT4G02480
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function ATP binding nucleoside-triphosphatase activity nucleotide binding protein binding
Sequence	AT4G02480.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_137747	Accession Taxon NP_001117220 Arabidopsis thaliana NP_171788 Arabidopsis thaliana NP_176404 Arabidopsis thaliana NP_194217 Arabidopsis thaliana NP_567238 ( AT4G02480 ) Arabidopsis thaliana NP_001050084 Oryza sativa Japonica Group NP_001060602 Oryza sativa Japonica Group e_gw1.3.162.1 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_27000013 Physcomitrella patens subsp. patens 29986.m001585 Ricinus communis 30147.m014522 Ricinus communis XP_002954598 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF49879 4.3E-8 144 235 IPR008984 SMAD/FHA domain PANTHER PTHR23074 0.0 439 1265 No hit NA Coils Coil NA 921 942 No hit NA SUPERFAMILY SSF52540 2.8E-60 960 1238 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMART SM00382 3.0E-19 997 1134 IPR003593 AAA+ ATPase domain Pfam PF00004 1.7E-36 1001 1130 IPR003959 ATPase, AAA-type, core ProSitePatterns PS00674 NA 1104 1123 IPR003960 ATPase, AAA-type, conserved site