Basic information
Locus name	AT3G48990
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: apoplast, chloroplast;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process metabolic process molecular function catalytic activity
Sequence	AT3G48990.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_126609	Accession Taxon NP_001077697 Arabidopsis thaliana NP_173472 Arabidopsis thaliana NP_173473 Arabidopsis thaliana NP_173474 Arabidopsis thaliana NP_174340 Arabidopsis thaliana NP_175579 Arabidopsis thaliana NP_176686 Arabidopsis thaliana NP_188760 Arabidopsis thaliana NP_188761 Arabidopsis thaliana NP_190468 ( AT3G48990 ) Arabidopsis thaliana NP_192425 Arabidopsis thaliana NP_198628 Arabidopsis thaliana NP_564115 Arabidopsis thaliana NP_849793 Arabidopsis thaliana NP_849844 Arabidopsis thaliana NP_973872 Arabidopsis thaliana 146546 Chlamydomonas reinhardtii ACO68802 Micromonas sp. RCC299 NP_001046069 Oryza sativa Japonica Group NP_001047819 Oryza sativa Japonica Group NP_001048867 Oryza sativa Japonica Group NP_001048992 Oryza sativa Japonica Group NP_001054304 Oryza sativa Japonica Group NP_001058252 Oryza sativa Japonica Group NP_001060922 Oryza sativa Japonica Group NP_001061353 Oryza sativa Japonica Group NP_001061935 Oryza sativa Japonica Group e_gw1.02.00.157.1 Ostreococcus tauri gw1.04.00.473.1 Ostreococcus tauri e_gw1.12.278.1 Physcomitrella patens subsp. patens e_gw1.167.67.1 Physcomitrella patens subsp. patens e_gw1.18.145.1 Physcomitrella patens subsp. patens e_gw1.38.65.1 Physcomitrella patens subsp. patens e_gw1.51.32.1 Physcomitrella patens subsp. patens e_gw1.6.71.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_520075 Physcomitrella patens subsp. patens estExt_fgenesh1_pm.C_200030 Physcomitrella patens subsp. patens estExt_fgenesh2_pg.C_710053 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_185000045 Physcomitrella patens subsp. patens 28429.m000109 Ricinus communis 28872.m000246 Ricinus communis 29589.m001235 Ricinus communis 29929.m004700 Ricinus communis 29953.m000429 Ricinus communis 30073.m002251 Ricinus communis 30078.m002285 Ricinus communis 30131.m006921 Ricinus communis 30147.m013735 Ricinus communis 30170.m014327 Ricinus communis 30190.m010972 Ricinus communis 30190.m011196 Ricinus communis fgenesh1_pg.C_chr_3000719 Thalassiosira pseudonana CCMP1335 thaps1_ua_kg.chr_4000293 Thalassiosira pseudonana CCMP1335 XP_002948013 Volvox carteri f. nagariensis XP_002955385 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24095 1.2E-224 1 513 No hit NA SUPERFAMILY SSF56801 2.2E-140 5 511 No hit NA Pfam PF00501 1.0E-101 32 440 IPR000873 AMP-dependent synthetase/ligase ProSitePatterns PS00455 NA 167 178 IPR020845 AMP-binding, conserved site Pfam PF13193 2.6E-10 481 508 IPR025110 Domain of unknown function DUF4009
Subcellular Localization
Localization	peroxisome
Evidence	SUBAcon
Pubmed ID	23180787