Basic information
Locus name	AT5G24470
Alias	APRR5
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 5 (APRR5); FUNCTIONS IN: transcription regulator activity, two-component response regulator activity; INVOLVED IN: response to red light, response to far red light, photomorphogenesis, circadian rhythm; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver region (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription regulator/ two-component response regulator (TAIR:AT2G46790.1); Has 37938 Blast hits to 37522 proteins in 1634 species: Archae - 139; Bacteria - 31842; Metazoa - 24; Fungi - 383; Plants - 1541; Viruses - 1; Other Eukaryotes - 4008 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process phosphorelay signal transduction system regulation of transcription, DNA-dependent molecular function phosphorelay response regulator activity protein binding
Pathway	Reactome REACT_14797
Sequence	AT5G24470.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_178368	Accession Taxon NP_568446 ( AT5G24470 ) Arabidopsis thaliana NP_001063760 Oryza sativa Japonica Group 29866.m000621 Ricinus communis 30076.m004450 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR26402 1.3E-35 159 281 No hit NA SMART SM00448 7.7E-26 159 274 IPR001789 Signal transduction response regulator, receiver domain SUPERFAMILY SSF52172 2.7E-29 159 284 IPR011006 CheY-like superfamily ProSiteProfiles PS50110 28.1 160 278 IPR001789 Signal transduction response regulator, receiver domain Pfam PF00072 2.8E-20 161 272 IPR001789 Signal transduction response regulator, receiver domain Pfam PF06203 3.3E-18 618 661 IPR010402 CCT domain ProSiteProfiles PS51017 15.3 618 660 IPR010402 CCT domain
Mutant Image
delayed senescence
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787