Basic information
Locus name	AT5G08370
Alias	ATAGAL2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	Arabidopsis thaliana ALPHA-GALACTOSIDASE 2 (AtAGAL2); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: positive regulation of flower development, leaf morphogenesis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: AtAGAL1 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 1); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds (TAIR:AT5G08380.1); Has 886 Blast hits to 883 proteins in 193 species: Archae - 0; Bacteria - 201; Metazoa - 241; Fungi - 191; Plants - 105; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process carbohydrate metabolic process molecular function hydrolase activity, hydrolyzing O-glycosyl compounds
Pathway	KEGG map00052 (EC 3.2.1.22) map00561 (EC 3.2.1.22) map00600 (EC 3.2.1.22) map00603 (EC 3.2.1.22)
Sequence	AT5G08370.1 | Genomic | mRNA | CDS | Protein AT5G08370.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127620	Accession Taxon NP_001031855 Arabidopsis thaliana NP_191190 Arabidopsis thaliana NP_196455 Arabidopsis thaliana NP_568193 ( AT5G08370 ) Arabidopsis thaliana NP_974447 Arabidopsis thaliana 116873 Chlamydomonas reinhardtii NP_001059549 Oryza sativa Japonica Group NP_001060639 Oryza sativa Japonica Group NP_001064939 Oryza sativa Japonica Group fgenesh1_pg.scaffold_19000169 Physcomitrella patens subsp. patens 29681.m001369 Ricinus communis 29729.m002350 Ricinus communis 29851.m002360 Ricinus communis 30131.m007290 Ricinus communis 30131.m007292 Ricinus communis 30131.m007295 Ricinus communis XP_002955466 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11452 3.5E-194 15 396 No hit NA Pfam PF02065 1.5E-18 25 126 IPR000111 Glycoside hydrolase, clan GH-D SUPERFAMILY SSF51445 6.0E-104 33 303 IPR017853 Glycoside hydrolase, superfamily PRINTS PR00740 2.7E-66 34 53 IPR002241 Glycoside hydrolase, family 27 PRINTS PR00740 2.7E-66 70 85 IPR002241 Glycoside hydrolase, family 27 ProSitePatterns PS00512 NA 75 91 IPR000111 Glycoside hydrolase, clan GH-D PRINTS PR00740 2.7E-66 111 132 IPR002241 Glycoside hydrolase, family 27 Pfam PF02065 2.2E-5 144 218 IPR000111 Glycoside hydrolase, clan GH-D PRINTS PR00740 2.7E-66 146 163 IPR002241 Glycoside hydrolase, family 27 PRINTS PR00740 2.7E-66 173 191 IPR002241 Glycoside hydrolase, family 27 PRINTS PR00740 2.7E-66 238 257 IPR002241 Glycoside hydrolase, family 27 PRINTS PR00740 2.7E-66 259 280 IPR002241 Glycoside hydrolase, family 27 SUPERFAMILY SSF51011 4.8E-29 298 392 No hit NA
Subcellular Localization
Localization	extracellular
Evidence	SUBAcon
Pubmed ID	23180787