Basic information
Locus name	AT4G11640
Alias	ATSR
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	ARABIDOPSIS THALIANA SERINE RACEMASE (ATSR); FUNCTIONS IN: serine racemase activity; INVOLVED IN: serine family amino acid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: OMR1 (L-O-METHYLTHREONINE RESISTANT 1); L-threonine ammonia-lyase (TAIR:AT3G10050.1); Has 12362 Blast hits to 12355 proteins in 1438 species: Archae - 290; Bacteria - 7009; Metazoa - 494; Fungi - 439; Plants - 98; Viruses - 0; Other Eukaryotes - 4032 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process cellular amino acid metabolic process molecular function pyridoxal phosphate binding
Sequence	AT4G11640.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_126759	Accession Taxon NP_187616 Arabidopsis thaliana NP_192901 ( AT4G11640 ) Arabidopsis thaliana CMH271C Cyanidioschyzon merolae strain 10D CMR420C Cyanidioschyzon merolae strain 10D 196595 Chlamydomonas reinhardtii 24355 Chlamydomonas reinhardtii ACO63423 Micromonas sp. RCC299 ACO64394 Micromonas sp. RCC299 ACO66231 Micromonas sp. RCC299 NP_001051069 Oryza sativa Japonica Group NP_001053521 Oryza sativa Japonica Group 1200010159 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_05.00010199 Ostreococcus tauri e_gw1.178.80.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_3700038 Physcomitrella patens subsp. patens 29815.m000489 Ricinus communis 30190.m011195 Ricinus communis 55084.m000024 Ricinus communis estExt_gwp_gw1.C_chr_120078 Thalassiosira pseudonana CCMP1335 fgenesh1_pg.C_chr_6000454 Thalassiosira pseudonana CCMP1335 gw1.5.152.1 Thalassiosira pseudonana CCMP1335 XP_002945744 Volvox carteri f. nagariensis XP_002948423 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10314 1.0E-177 1 328 No hit NA SUPERFAMILY SSF53686 9.0E-90 12 321 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily Pfam PF00291 3.2E-71 23 315 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily ProSitePatterns PS00165 NA 50 63 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site