Basic information
Locus name	AT5G43170
Alias	AZF3
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	ARABIDOPSIS ZINC-FINGER PROTEIN 3 (AZF3); FUNCTIONS IN: transcription repressor activity, transcription factor activity, DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: hyperosmotic salinity response, response to cold, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: STZ (salt tolerance zinc finger); nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding (TAIR:AT1G27730.1); Has 4461 Blast hits to 3358 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 3880; Fungi - 0; Plants - 468; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function zinc ion binding
Sequence	AT5G43170.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_146894	Accession Taxon NP_001118663 Arabidopsis thaliana NP_174094 Arabidopsis thaliana NP_188592 Arabidopsis thaliana NP_196054 Arabidopsis thaliana NP_199131 ( AT5G43170 ) Arabidopsis thaliana NP_001050650 Oryza sativa Japonica Group NP_001051366 Oryza sativa Japonica Group NP_001067148 Oryza sativa Japonica Group 28152.m000908 Ricinus communis 30170.m013751 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR26374 2.4E-25 30 155 No hit NA Pfam PF13912 6.4E-12 75 99 No hit NA ProSiteProfiles PS50157 9.4 75 97 IPR007087 Zinc finger, C2H2 SMART SM00355 0.2 75 97 IPR015880 Zinc finger, C2H2-like SUPERFAMILY SSF57667 2.5E-10 75 140 No hit NA ProSitePatterns PS00028 NA 77 97 IPR007087 Zinc finger, C2H2 Pfam PF13912 1.2E-9 118 142 No hit NA ProSiteProfiles PS50157 10.3 118 140 IPR007087 Zinc finger, C2H2 SMART SM00355 0.1 118 140 IPR015880 Zinc finger, C2H2-like ProSitePatterns PS00028 NA 120 140 IPR007087 Zinc finger, C2H2
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787