Basic information
Locus name	AT3G07590
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:snRNP
Effect for Senescence	Unclear
Gene Description	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1.
Evidence	Molecular evidence: SSH and Northern [Ref 1]
References	1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M Large-scale identification of leaf senescence-associated genes. Plant J. 2003 Dec;36(5):629-42
Sequence	AT3G07590.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127814	Accession Taxon NP_187416 ( AT3G07590 ) Arabidopsis thaliana NP_192193 Arabidopsis thaliana CMF084C Cyanidioschyzon merolae strain 10D 122530 Chlamydomonas reinhardtii NP_113140 Guillardia theta ACO62723 Micromonas sp. RCC299 NP_001047268 Oryza sativa Japonica Group NP_001053049 Oryza sativa Japonica Group 0400010232 Ostreococcus tauri e_gw1.726.1.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1160015 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_370112 Physcomitrella patens subsp. patens 29647.m002108 Ricinus communis fgenesh1_pg.C_chr_6000755 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23338 1.1E-63 1 113 IPR027141 U6 snRNA-associated Sm-like protein LSm4/Small nuclear ribonucleoprotein Sm D1/D3 SUPERFAMILY SSF50182 4.0E-24 4 113 IPR010920 Like-Sm (LSM) domain SMART SM00651 1.3E-16 5 70 IPR006649 Ribonucleoprotein LSM domain, eukaryotic/archaea-type Pfam PF01423 2.4E-16 6 70 IPR001163 Ribonucleoprotein LSM domain
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787