Basic information   
Locus name AT3G52570
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers
Effect for Senescenceunclear
Gene DescriptionATP binding; FUNCTIONS IN: ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: hydrolase, alpha/beta fold family protein (TAIR:AT4G10030.1); Has 1653 Blast hits to 1653 proteins in 547 species: Archae - 7; Bacteria - 978; Metazoa - 145; Fungi - 101; Plants - 46; Viruses - 0; Other Eukaryotes - 376 (source: NCBI BLink).
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

SequenceAT3G52570.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: AT3G52570.1 
miRNA: ath-miR824
miRNA: ath-miR824
mfe: -35.5 kcal/mol 
p-value: 0.000109 

position: 613 
target 5' A                    U  3' 
           UCCCUUCUCGCAAGUGG CU     
           AGGGAAGAGUGUUUACC GA     
miRNA  3'                   A  U  5' 
Ortholog Group      
Ortholog Groups: OG5_155994
AccessionTaxon
NP_190825 ( AT3G52570 ) Arabidopsis thaliana
97623Chlamydomonas reinhardtii
NP_001044879Oryza sativa Japonica Group
1200010152Ostreococcus tauri
e_gw1.227.38.1Physcomitrella patens subsp. patens
28629.m000570Ricinus communis
fgenesh1_pg.C_chr_16a000160Thalassiosira pseudonana CCMP1335
XP_002945828Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR109925.4E-6738327No hitNA
SUPERFAMILYSSF534742.6E-2445326No hitNA
PfamPF126973.0E-2457324No hitNA
Subcellular Localization   
Localizationmitochondrion
EvidenceSUBAcon
Pubmed ID23180787