Basic information
Locus name	AT3G27010
Alias	AT-TCP20
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	AT-TCP20; FUNCTIONS IN: transcription factor activity; INVOLVED IN: anatomical structure morphogenesis, cell cycle; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.10 ten leaves visible, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor, putative (TAIR:AT5G41030.1); Has 345 Blast hits to 340 proteins in 103 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 0; Plants - 336; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT3G27010.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_177844	Accession Taxon NP_189337 ( AT3G27010 ) Arabidopsis thaliana NP_001045247 Oryza sativa Japonica Group 29929.m004612 Ricinus communis 30131.m007038 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31072 8.3E-51 73 140 No hit NA Pfam PF03634 3.5E-36 73 154 IPR005333 Transcription factor, TCP ProSiteProfiles PS51369 28.0 78 132 IPR017887 Transcription factor TCP subgroup
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787