Basic information   
Locus name AT5G38860
AliasBIM3
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers
Effect for Senescenceunclear
Gene DescriptionBES1-interacting Myc-like protein 3 (BIM3); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix dimerisation region bHLH (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BIM2 (BES1-interacting Myc-like protein 2); DNA binding / transcription factor (TAIR:AT1G69010.1); Has 805 Blast hits to 803 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 24; Plants - 651; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
molecular function
SequenceAT5G38860.1 | Genomic | mRNA | CDS | Protein
Ortholog Group      
Ortholog Groups: OG5_132718
AccessionTaxon
NP_198702 ( AT5G38860 ) Arabidopsis thaliana
29790.m000843Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR125652.4E-9823298No hitNA
SUPERFAMILYSSF474593.3E-2031114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
ProSiteProfilesPS5088817.03385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-153586IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-133991IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Subcellular Localization   
Localizationnucleus
EvidenceSUBAcon
Pubmed ID23180787