Basic information
Locus name	AT4G15210
Alias	BAM5
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	BETA-AMYLASE 5 (BAM5); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to herbivore, starch catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: BAM6 (BETA-AMYLASE 6); beta-amylase/ catalytic/ cation binding (TAIR:AT2G32290.1); Has 524 Blast hits to 522 proteins in 120 species: Archae - 0; Bacteria - 70; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process polysaccharide catabolic process molecular function beta-amylase activity
Pathway	KEGG map00500 (EC 3.2.1.2) MetaCyc PWY-842
Sequence	AT4G15210.1 | Genomic | mRNA | CDS | Protein AT4G15210.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_164478	Accession Taxon NP_180788 Arabidopsis thaliana NP_567460 ( AT4G15210 ) Arabidopsis thaliana NP_849389 Arabidopsis thaliana NP_001059906 Oryza sativa Japonica Group NP_001059907 Oryza sativa Japonica Group 30156.m001723 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR32210 7.8E-234 1 498 No hit NA SUPERFAMILY SSF51445 6.0E-195 12 482 IPR017853 Glycoside hydrolase, superfamily Pfam PF01373 4.9E-121 17 434 IPR001554 Glycoside hydrolase, family 14 PRINTS PR00750 1.1E-91 49 63 IPR001554 Glycoside hydrolase, family 14 PRINTS PR00750 1.1E-91 70 88 IPR001554 Glycoside hydrolase, family 14 PRINTS PR00750 1.1E-91 92 113 IPR001554 Glycoside hydrolase, family 14 ProSitePatterns PS00506 NA 96 104 IPR018238 Glycoside hydrolase, family 14, conserved site PRINTS PR00842 1.3E-33 175 184 IPR001371 Glycoside hydrolase, family 14B, plant PRINTS PR00750 1.1E-91 185 207 IPR001554 Glycoside hydrolase, family 14 ProSitePatterns PS00679 NA 185 195 IPR018238 Glycoside hydrolase, family 14, conserved site PRINTS PR00750 1.1E-91 257 276 IPR001554 Glycoside hydrolase, family 14 PRINTS PR00750 1.1E-91 293 309 IPR001554 Glycoside hydrolase, family 14 PRINTS PR00750 1.1E-91 310 321 IPR001554 Glycoside hydrolase, family 14 PRINTS PR00750 1.1E-91 328 351 IPR001554 Glycoside hydrolase, family 14 PRINTS PR00842 1.3E-33 331 341 IPR001371 Glycoside hydrolase, family 14B, plant PRINTS PR00750 1.1E-91 365 387 IPR001554 Glycoside hydrolase, family 14 PRINTS PR00842 1.3E-33 373 382 IPR001371 Glycoside hydrolase, family 14B, plant PRINTS PR00842 1.3E-33 387 396 IPR001371 Glycoside hydrolase, family 14B, plant PRINTS PR00842 1.3E-33 402 418 IPR001371 Glycoside hydrolase, family 14B, plant PRINTS PR00842 1.3E-33 420 434 IPR001371 Glycoside hydrolase, family 14B, plant PRINTS PR00842 1.3E-33 435 449 IPR001371 Glycoside hydrolase, family 14B, plant
Subcellular Localization
Localization	extracellular
Evidence	SUBAcon
Pubmed ID	23180787