Basic information
Locus name	AT3G49800
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	BSD domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT5G65910.1); Has 131 Blast hits to 121 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 1; Plants - 111; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT3G49800.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_160247	Accession Taxon NP_190549 ( AT3G49800 ) Arabidopsis thaliana NP_569021 Arabidopsis thaliana NP_001044357 Oryza sativa Japonica Group NP_001056011 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_110055 Physcomitrella patens subsp. patens fgenesh2_pg.scaffold_75000023 Physcomitrella patens subsp. patens 29661.m000948 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31923 7.3E-149 7 428 No hit NA SUPERFAMILY SSF140383 2.0E-22 164 251 No hit NA ProSiteProfiles PS50858 11.4 195 247 IPR005607 BSD SMART SM00751 5.3E-16 195 247 IPR005607 BSD Pfam PF03909 1.3E-13 196 252 IPR005607 BSD