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| Locus name | AT5G44080 |
| Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Transcription regulation | | Effect for Senescence | unclear | | Gene Description | bZIP transcription factor family protein; FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: GBF4; DNA binding / sequence-specific DNA binding / transcription factor (TAIR:AT1G03970.1); Has 730 Blast hits to 730 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 209; Fungi - 2; Plants - 496; Viruses - 1; Other Eukaryotes - 22 (source: NCBI BLink). | | Evidence | Genomic evidence:microarray data [Ref 1] | | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | | Gene Ontology | | | Sequence | AT5G44080.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction  | |
| | Details | | target: AT5G44080.1
miRNA: ath-miR5656
miRNA: ath-miR5656
mfe: -32.3 kcal/mol
p-value: 0.000296
position: 13
target 5' A U U A 3'
AAGCCC AAUCUCUGCUUC GU
UUUGGG UUAGAGAUGAAG CA
miRNA 3' U 5'
target: AT5G44080.1
miRNA: ath-miR776
miRNA: ath-miR776
mfe: -27.3 kcal/mol
p-value: 0.001003
position: 630
target 5' C C U 3'
GGCGUCGG GGAGGAUUUGGA
UUGUAGUU UCUUCUGAAUCU
miRNA 3' A 5'
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| Ortholog Group | |
| | Ortholog Groups: OG5_156386 | |
| Cross Link | |
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