Basic information
Locus name	AT4G01840
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 5 (KCO5); FUNCTIONS IN: outward rectifier potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), EF-HAND 1 (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: KCO6; outward rectifier potassium channel (TAIR:AT4G18160.1); Has 3366 Blast hits to 3108 proteins in 596 species: Archae - 78; Bacteria - 1146; Metazoa - 1138; Fungi - 131; Plants - 153; Viruses - 0; Other Eukaryotes - 720 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process potassium ion transmembrane transport cellular component membrane molecular function potassium channel activity
Sequence	AT4G01840.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_162722	Accession Taxon NP_192093 ( AT4G01840 ) Arabidopsis thaliana estExt_fgenesh1_pg.C_Chr_06.00010315 Ostreococcus tauri e_gw1.9.288.1 Physcomitrella patens subsp. patens gw1.114.67.1 Physcomitrella patens subsp. patens 30076.m004561 Ricinus communis fgenesh1_pg.C_chr_1000818 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11003 1.9E-101 2 397 No hit NA SUPERFAMILY SSF81324 4.1E-24 114 227 No hit NA Pfam PF07885 1.3E-16 123 202 IPR013099 Ion transport 2 PRINTS PR01333 1.5E-8 159 187 IPR003280 Two pore domain potassium channel SUPERFAMILY SSF81324 3.0E-21 237 343 No hit NA Pfam PF07885 1.1E-11 253 323 IPR013099 Ion transport 2 PRINTS PR01333 1.5E-8 286 295 IPR003280 Two pore domain potassium channel
Subcellular Localization
Localization	vacuole
Evidence	SUBAcon
Pubmed ID	23180787